Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCNKO75909 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCNKO75909 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCNKO75909 AP3S2-216ENST00000617003 1561 ntBASIC12.82□□□□□ -0.36
CCNKO75909 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.82□□□□□ -0.36
CCNKO75909 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCNKO75909 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCNKO75909 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.82□□□□□ -0.36
CCNKO75909 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCNKO75909 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CCNKO75909 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC12.82□□□□□ -0.36
CCNKO75909 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC12.82□□□□□ -0.36
CCNKO75909 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CCNKO75909 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCNKO75909 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCNKO75909 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCNKO75909 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCNKO75909 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCNKO75909 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CCNKO75909 COPS8-203ENST00000409334 794 ntTSL 5 BASIC12.82□□□□□ -0.36
CCNKO75909 RAB17-203ENST00000409576 466 ntTSL 3 BASIC12.82□□□□□ -0.36
CCNKO75909 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CCNKO75909 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC12.82□□□□□ -0.36
CCNKO75909 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.82□□□□□ -0.36
CCNKO75909 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC12.82□□□□□ -0.36
CCNKO75909 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
CCNKO75909 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CCNKO75909 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCNKO75909 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCNKO75909 PNMT-203ENST00000581428 677 ntTSL 2 BASIC12.82□□□□□ -0.36
CCNKO75909 MIR4515-201ENST00000584082 81 ntBASIC12.82□□□□□ -0.36
CCNKO75909 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.82□□□□□ -0.36
CCNKO75909 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC12.82□□□□□ -0.36
CCNKO75909 AC008667.4-201ENST00000607370 168 ntBASIC12.82□□□□□ -0.36
CCNKO75909 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
CCNKO75909 AC107918.4-202ENST00000641623 219 ntBASIC12.82□□□□□ -0.36
CCNKO75909 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCNKO75909 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC12.82□□□□□ -0.36
CCNKO75909 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCNKO75909 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.82□□□□□ -0.36
CCNKO75909 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCNKO75909 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCNKO75909 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.82□□□□□ -0.36
CCNKO75909 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCNKO75909 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCNKO75909 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC12.82□□□□□ -0.36
CCNKO75909 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.82□□□□□ -0.36
CCNKO75909 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.81□□□□□ -0.36
CCNKO75909 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.81□□□□□ -0.36
CCNKO75909 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.81□□□□□ -0.36
CCNKO75909 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.81□□□□□ -0.36
CCNKO75909 AGAP12P-201ENST00000585227 2359 ntBASIC12.81□□□□□ -0.36
CCNKO75909 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CCNKO75909 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCNKO75909 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.81□□□□□ -0.36
CCNKO75909 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCNKO75909 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
CCNKO75909 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC12.81□□□□□ -0.36
CCNKO75909 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCNKO75909 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCNKO75909 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCNKO75909 AL157996.1-201ENST00000624684 2299 ntBASIC12.81□□□□□ -0.36
CCNKO75909 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCNKO75909 DDX12P-201ENST00000432996 2947 ntBASIC12.81□□□□□ -0.36
CCNKO75909 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CCNKO75909 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCNKO75909 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCNKO75909 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCNKO75909 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCNKO75909 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCNKO75909 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCNKO75909 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.81□□□□□ -0.36
CCNKO75909 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC12.81□□□□□ -0.36
CCNKO75909 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCNKO75909 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CCNKO75909 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CCNKO75909 PHKG1P2-201ENST00000457537 863 ntBASIC12.81□□□□□ -0.36
CCNKO75909 KRT18P21-201ENST00000515767 1272 ntBASIC12.81□□□□□ -0.36
CCNKO75909 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCNKO75909 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC12.81□□□□□ -0.36
CCNKO75909 AC002347.1-201ENST00000569543 541 ntBASIC12.81□□□□□ -0.36
CCNKO75909 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.81□□□□□ -0.36
CCNKO75909 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CCNKO75909 AC060814.4-201ENST00000594169 2163 ntBASIC12.81□□□□□ -0.36
CCNKO75909 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CCNKO75909 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCNKO75909 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCNKO75909 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCNKO75909 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.81□□□□□ -0.36
CCNKO75909 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCNKO75909 WDR60-202ENST00000407559 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCNKO75909 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCNKO75909 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCNKO75909 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CCNKO75909 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCNKO75909 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCNKO75909 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC12.81□□□□□ -0.36
CCNKO75909 AC018665.1-201ENST00000622927 1362 ntBASIC12.81□□□□□ -0.36
CCNKO75909 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCNKO75909 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms