Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.17□□□□□ -0.46
CLN5O75503 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLN5O75503 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
CLN5O75503 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CLN5O75503 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.17□□□□□ -0.46
CLN5O75503 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.17□□□□□ -0.46
CLN5O75503 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLN5O75503 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLN5O75503 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.17□□□□□ -0.46
CLN5O75503 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLN5O75503 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLN5O75503 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CLN5O75503 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLN5O75503 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLN5O75503 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CLN5O75503 RPSAP43-201ENST00000402237 625 ntBASIC12.17□□□□□ -0.46
CLN5O75503 UPF3AP3-201ENST00000420996 769 ntBASIC12.17□□□□□ -0.46
CLN5O75503 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLN5O75503 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.17□□□□□ -0.46
CLN5O75503 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.17□□□□□ -0.46
CLN5O75503 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.17□□□□□ -0.46
CLN5O75503 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.17□□□□□ -0.46
CLN5O75503 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.17□□□□□ -0.46
CLN5O75503 SLED1-202ENST00000512051 380 ntBASIC12.17□□□□□ -0.46
CLN5O75503 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.17□□□□□ -0.46
CLN5O75503 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CLN5O75503 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.17□□□□□ -0.46
CLN5O75503 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.17□□□□□ -0.46
CLN5O75503 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
CLN5O75503 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.17□□□□□ -0.46
CLN5O75503 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLN5O75503 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.17□□□□□ -0.46
CLN5O75503 AL589739.1-201ENST00000607720 493 ntBASIC12.17□□□□□ -0.46
CLN5O75503 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.17□□□□□ -0.46
CLN5O75503 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLN5O75503 ACE3P-201ENST00000423435 1973 ntBASIC12.17□□□□□ -0.46
CLN5O75503 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.17□□□□□ -0.46
CLN5O75503 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLN5O75503 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CLN5O75503 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLN5O75503 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLN5O75503 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLN5O75503 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLN5O75503 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CLN5O75503 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.17□□□□□ -0.46
CLN5O75503 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.17□□□□□ -0.46
CLN5O75503 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CLN5O75503 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CLN5O75503 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CLN5O75503 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
CLN5O75503 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLN5O75503 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CLN5O75503 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CLN5O75503 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CLN5O75503 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CLN5O75503 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CLN5O75503 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.16□□□□□ -0.46
CLN5O75503 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CLN5O75503 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CLN5O75503 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CLN5O75503 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CLN5O75503 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.16□□□□□ -0.46
CLN5O75503 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CLN5O75503 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CLN5O75503 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
CLN5O75503 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.16□□□□□ -0.46
CLN5O75503 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.16□□□□□ -0.46
CLN5O75503 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CLN5O75503 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12.16□□□□□ -0.46
CLN5O75503 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CLN5O75503 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC12.16□□□□□ -0.46
CLN5O75503 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CLN5O75503 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
CLN5O75503 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.16□□□□□ -0.46
CLN5O75503 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC12.16□□□□□ -0.46
CLN5O75503 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.16□□□□□ -0.46
CLN5O75503 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CLN5O75503 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.16□□□□□ -0.46
CLN5O75503 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
CLN5O75503 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.16□□□□□ -0.46
CLN5O75503 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.16□□□□□ -0.46
CLN5O75503 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CLN5O75503 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CLN5O75503 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.16□□□□□ -0.46
CLN5O75503 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CLN5O75503 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CLN5O75503 RGL4-209ENST00000612432 2649 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CLN5O75503 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CLN5O75503 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CLN5O75503 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CLN5O75503 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CLN5O75503 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CLN5O75503 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.16□□□□□ -0.46
CLN5O75503 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CLN5O75503 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CLN5O75503 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CLN5O75503 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.16□□□□□ -0.46
CLN5O75503 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CLN5O75503 AC020658.7-201ENST00000624274 2442 ntBASIC12.16□□□□□ -0.46
CLN5O75503 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms