Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC18.13■□□□□ 0.49
CACNA1FO60840 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC18.13■□□□□ 0.49
CACNA1FO60840 MIR645-201ENST00000385283 94 ntBASIC18.13■□□□□ 0.49
CACNA1FO60840 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC18.13■□□□□ 0.49
CACNA1FO60840 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA1FO60840 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC18.13■□□□□ 0.49
CACNA1FO60840 AL133466.1-201ENST00000447582 150 ntBASIC18.13■□□□□ 0.49
CACNA1FO60840 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC18.13■□□□□ 0.49
CACNA1FO60840 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC18.13■□□□□ 0.49
CACNA1FO60840 RN7SL181P-201ENST00000462921 277 ntBASIC18.13■□□□□ 0.49
CACNA1FO60840 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA1FO60840 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC18.13■□□□□ 0.49
CACNA1FO60840 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC18.13■□□□□ 0.49
CACNA1FO60840 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC18.13■□□□□ 0.49
CACNA1FO60840 NDUFB10P1-201ENST00000567319 521 ntBASIC18.13■□□□□ 0.49
CACNA1FO60840 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC18.13■□□□□ 0.49
CACNA1FO60840 CU633904.3-201ENST00000624042 1029 ntBASIC18.13■□□□□ 0.49
CACNA1FO60840 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA1FO60840 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA1FO60840 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CACNA1FO60840 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
CACNA1FO60840 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA1FO60840 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC18.13■□□□□ 0.49
CACNA1FO60840 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CACNA1FO60840 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA1FO60840 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC18.13■□□□□ 0.49
CACNA1FO60840 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC18.13■□□□□ 0.49
CACNA1FO60840 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CACNA1FO60840 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1FO60840 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC18.12■□□□□ 0.49
CACNA1FO60840 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1FO60840 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CACNA1FO60840 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1FO60840 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1FO60840 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1FO60840 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC18.12■□□□□ 0.49
CACNA1FO60840 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1FO60840 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1FO60840 SOD2-202ENST00000367054 815 ntTSL 2 BASIC18.12■□□□□ 0.49
CACNA1FO60840 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC18.12■□□□□ 0.49
CACNA1FO60840 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC18.12■□□□□ 0.49
CACNA1FO60840 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC18.12■□□□□ 0.49
CACNA1FO60840 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
CACNA1FO60840 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC18.12■□□□□ 0.49
CACNA1FO60840 AC012044.1-201ENST00000603431 297 ntBASIC18.12■□□□□ 0.49
CACNA1FO60840 AC068760.1-201ENST00000493579 1953 ntBASIC18.12■□□□□ 0.49
CACNA1FO60840 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1FO60840 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC18.12■□□□□ 0.49
CACNA1FO60840 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CACNA1FO60840 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC18.12■□□□□ 0.49
CACNA1FO60840 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
CACNA1FO60840 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC18.12■□□□□ 0.49
CACNA1FO60840 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1FO60840 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1FO60840 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1FO60840 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1FO60840 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CACNA1FO60840 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1FO60840 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1FO60840 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CACNA1FO60840 AL807761.2-201ENST00000422849 729 ntBASIC18.11■□□□□ 0.49
CACNA1FO60840 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC18.11■□□□□ 0.49
CACNA1FO60840 RN7SL530P-201ENST00000485097 298 ntBASIC18.11■□□□□ 0.49
CACNA1FO60840 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1FO60840 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CACNA1FO60840 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC18.11■□□□□ 0.49
CACNA1FO60840 AL161773.1-201ENST00000624845 863 ntBASIC18.11■□□□□ 0.49
CACNA1FO60840 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC18.11■□□□□ 0.49
CACNA1FO60840 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC18.11■□□□□ 0.49
CACNA1FO60840 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1FO60840 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1FO60840 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1FO60840 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1FO60840 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1FO60840 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1FO60840 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1FO60840 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1FO60840 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1FO60840 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1FO60840 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1FO60840 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CACNA1FO60840 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1FO60840 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1FO60840 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1FO60840 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1FO60840 SARS-202ENST00000369923 1882 ntTSL 5 BASIC18.11■□□□□ 0.49
CACNA1FO60840 AL512430.1-201ENST00000392575 860 ntBASIC18.11■□□□□ 0.49
CACNA1FO60840 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC18.11■□□□□ 0.49
CACNA1FO60840 AK2P2-201ENST00000439142 405 ntBASIC18.11■□□□□ 0.49
CACNA1FO60840 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CACNA1FO60840 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CACNA1FO60840 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC18.11■□□□□ 0.49
CACNA1FO60840 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1FO60840 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC18.11■□□□□ 0.49
CACNA1FO60840 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1FO60840 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC18.11■□□□□ 0.49
CACNA1FO60840 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1FO60840 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1FO60840 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CACNA1FO60840 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms