Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A2O43868 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC28A2O43868 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
SLC28A2O43868 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A2O43868 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A2O43868 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC28A2O43868 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A2O43868 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC28A2O43868 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SLC28A2O43868 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A2O43868 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC28A2O43868 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.32□□□□□ -0.12
SLC28A2O43868 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A2O43868 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A2O43868 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A2O43868 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC28A2O43868 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC28A2O43868 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
SLC28A2O43868 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SLC28A2O43868 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A2O43868 AC015818.8-201ENST00000587907 1519 ntBASIC14.31□□□□□ -0.12
SLC28A2O43868 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A2O43868 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC28A2O43868 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A2O43868 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A2O43868 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC28A2O43868 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC28A2O43868 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A2O43868 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A2O43868 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SLC28A2O43868 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A2O43868 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A2O43868 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.31□□□□□ -0.12
SLC28A2O43868 FAM197Y7-201ENST00000432892 766 ntBASIC14.31□□□□□ -0.12
SLC28A2O43868 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.31□□□□□ -0.12
SLC28A2O43868 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A2O43868 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A2O43868 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A2O43868 FGFR3P5-201ENST00000564496 886 ntBASIC14.31□□□□□ -0.12
SLC28A2O43868 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC28A2O43868 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A2O43868 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A2O43868 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A2O43868 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SLC28A2O43868 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SLC28A2O43868 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A2O43868 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A2O43868 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
SLC28A2O43868 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A2O43868 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC28A2O43868 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC28A2O43868 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A2O43868 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A2O43868 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A2O43868 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A2O43868 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A2O43868 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A2O43868 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A2O43868 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A2O43868 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A2O43868 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A2O43868 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A2O43868 AC006001.1-201ENST00000325130 474 ntBASIC14.3□□□□□ -0.12
SLC28A2O43868 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A2O43868 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.3□□□□□ -0.12
SLC28A2O43868 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC28A2O43868 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.3□□□□□ -0.12
SLC28A2O43868 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.3□□□□□ -0.12
SLC28A2O43868 Z97180.1-201ENST00000445173 988 ntBASIC14.3□□□□□ -0.12
SLC28A2O43868 EEF1DP6-201ENST00000449232 372 ntBASIC14.3□□□□□ -0.12
SLC28A2O43868 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
SLC28A2O43868 COX5BP1-201ENST00000507622 393 ntBASIC14.3□□□□□ -0.12
SLC28A2O43868 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.3□□□□□ -0.12
SLC28A2O43868 AC078819.1-201ENST00000547454 765 ntBASIC14.3□□□□□ -0.12
SLC28A2O43868 AC012085.1-201ENST00000548270 765 ntBASIC14.3□□□□□ -0.12
SLC28A2O43868 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
SLC28A2O43868 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.3□□□□□ -0.12
SLC28A2O43868 AC025279.2-201ENST00000569730 653 ntBASIC14.3□□□□□ -0.12
SLC28A2O43868 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.3□□□□□ -0.12
SLC28A2O43868 SAMD11P1-201ENST00000571429 661 ntBASIC14.3□□□□□ -0.12
SLC28A2O43868 MIR3907-201ENST00000579424 151 ntBASIC14.3□□□□□ -0.12
SLC28A2O43868 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A2O43868 AC000095.1-201ENST00000603208 874 ntBASIC14.3□□□□□ -0.12
SLC28A2O43868 AL096828.3-201ENST00000615354 462 ntBASIC14.3□□□□□ -0.12
SLC28A2O43868 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.3□□□□□ -0.12
SLC28A2O43868 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A2O43868 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A2O43868 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A2O43868 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A2O43868 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A2O43868 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A2O43868 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC28A2O43868 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC28A2O43868 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SLC28A2O43868 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A2O43868 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC14.3□□□□□ -0.12
SLC28A2O43868 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.3□□□□□ -0.12
SLC28A2O43868 AC140479.7-201ENST00000636301 2332 ntBASIC14.3□□□□□ -0.12
SLC28A2O43868 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC28A2O43868 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms