Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
NDUFA1O15239 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
NDUFA1O15239 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
NDUFA1O15239 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
NDUFA1O15239 AL121723.1-201ENST00000445194 1519 ntBASIC10.16□□□□□ -0.78
NDUFA1O15239 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
NDUFA1O15239 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
NDUFA1O15239 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
NDUFA1O15239 PCDHA5-203ENST00000614258 4248 ntBASIC10.16□□□□□ -0.78
NDUFA1O15239 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
NDUFA1O15239 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
NDUFA1O15239 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
NDUFA1O15239 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC10.16□□□□□ -0.78
NDUFA1O15239 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
NDUFA1O15239 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
NDUFA1O15239 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
NDUFA1O15239 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
NDUFA1O15239 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC10.15□□□□□ -0.78
NDUFA1O15239 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NDUFA1O15239 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC10.15□□□□□ -0.78
NDUFA1O15239 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
NDUFA1O15239 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NDUFA1O15239 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NDUFA1O15239 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC10.15□□□□□ -0.78
NDUFA1O15239 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NDUFA1O15239 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NDUFA1O15239 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
NDUFA1O15239 AL360270.3-201ENST00000609118 1348 ntBASIC10.15□□□□□ -0.78
NDUFA1O15239 FAM90A12P-201ENST00000519497 2375 ntBASIC10.15□□□□□ -0.78
NDUFA1O15239 FAM90A24P-201ENST00000520792 2369 ntBASIC10.15□□□□□ -0.78
NDUFA1O15239 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
NDUFA1O15239 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NDUFA1O15239 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
NDUFA1O15239 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NDUFA1O15239 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC10.15□□□□□ -0.78
NDUFA1O15239 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
NDUFA1O15239 AC114271.1-201ENST00000612689 2813 ntBASIC10.15□□□□□ -0.78
NDUFA1O15239 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
NDUFA1O15239 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
NDUFA1O15239 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
NDUFA1O15239 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NDUFA1O15239 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
NDUFA1O15239 RPSAP43-201ENST00000402237 625 ntBASIC10.15□□□□□ -0.78
NDUFA1O15239 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
NDUFA1O15239 AC074338.1-201ENST00000416825 156 ntBASIC10.15□□□□□ -0.78
NDUFA1O15239 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
NDUFA1O15239 SDHAP3-202ENST00000515467 728 ntBASIC10.15□□□□□ -0.78
NDUFA1O15239 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC10.15□□□□□ -0.78
NDUFA1O15239 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC10.15□□□□□ -0.78
NDUFA1O15239 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC10.15□□□□□ -0.78
NDUFA1O15239 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC10.15□□□□□ -0.78
NDUFA1O15239 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC10.15□□□□□ -0.78
NDUFA1O15239 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC10.15□□□□□ -0.78
NDUFA1O15239 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC10.15□□□□□ -0.78
NDUFA1O15239 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
NDUFA1O15239 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC10.15□□□□□ -0.78
NDUFA1O15239 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
NDUFA1O15239 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC10.15□□□□□ -0.78
NDUFA1O15239 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
NDUFA1O15239 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
NDUFA1O15239 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC10.15□□□□□ -0.78
NDUFA1O15239 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC10.15□□□□□ -0.78
NDUFA1O15239 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC10.15□□□□□ -0.78
NDUFA1O15239 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
NDUFA1O15239 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC10.15□□□□□ -0.78
NDUFA1O15239 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC10.15□□□□□ -0.78
NDUFA1O15239 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC10.15□□□□□ -0.78
NDUFA1O15239 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
NDUFA1O15239 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
NDUFA1O15239 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
NDUFA1O15239 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
NDUFA1O15239 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.79
NDUFA1O15239 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
NDUFA1O15239 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
NDUFA1O15239 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
NDUFA1O15239 PES1-204ENST00000402284 2144 ntTSL 5 BASIC10.15□□□□□ -0.79
NDUFA1O15239 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.79
NDUFA1O15239 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
NDUFA1O15239 AC012617.1-204ENST00000586340 2305 ntBASIC10.15□□□□□ -0.79
NDUFA1O15239 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
NDUFA1O15239 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
NDUFA1O15239 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC10.14□□□□□ -0.79
NDUFA1O15239 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
NDUFA1O15239 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
NDUFA1O15239 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
NDUFA1O15239 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
NDUFA1O15239 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
NDUFA1O15239 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC10.14□□□□□ -0.79
NDUFA1O15239 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
NDUFA1O15239 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
NDUFA1O15239 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
NDUFA1O15239 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
NDUFA1O15239 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC10.14□□□□□ -0.79
NDUFA1O15239 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
NDUFA1O15239 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
NDUFA1O15239 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
NDUFA1O15239 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC10.14□□□□□ -0.79
NDUFA1O15239 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
NDUFA1O15239 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
NDUFA1O15239 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC10.14□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms