Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TLR4O00206 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TLR4O00206 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TLR4O00206 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TLR4O00206 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TLR4O00206 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TLR4O00206 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TLR4O00206 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TLR4O00206 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TLR4O00206 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TLR4O00206 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TLR4O00206 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TLR4O00206 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TLR4O00206 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TLR4O00206 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TLR4O00206 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.62□□□□□ -0.07
TLR4O00206 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC14.62□□□□□ -0.07
TLR4O00206 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.62□□□□□ -0.07
TLR4O00206 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
TLR4O00206 SCARNA21-201ENST00000517026 139 ntBASIC14.62□□□□□ -0.07
TLR4O00206 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TLR4O00206 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.62□□□□□ -0.07
TLR4O00206 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TLR4O00206 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TLR4O00206 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.62□□□□□ -0.07
TLR4O00206 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.62□□□□□ -0.07
TLR4O00206 AC020922.3-201ENST00000595064 547 ntBASIC14.62□□□□□ -0.07
TLR4O00206 MIR6720-201ENST00000611664 98 ntBASIC14.62□□□□□ -0.07
TLR4O00206 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.62□□□□□ -0.07
TLR4O00206 AC027601.3-201ENST00000622907 509 ntBASIC14.62□□□□□ -0.07
TLR4O00206 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.62□□□□□ -0.07
TLR4O00206 Z98259.2-201ENST00000641583 609 ntBASIC14.62□□□□□ -0.07
TLR4O00206 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TLR4O00206 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TLR4O00206 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TLR4O00206 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TLR4O00206 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TLR4O00206 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TLR4O00206 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
TLR4O00206 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
TLR4O00206 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TLR4O00206 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TLR4O00206 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TLR4O00206 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TLR4O00206 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.62□□□□□ -0.07
TLR4O00206 AC023090.2-201ENST00000625182 2110 ntBASIC14.62□□□□□ -0.07
TLR4O00206 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TLR4O00206 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TLR4O00206 AC007292.2-201ENST00000593524 1812 ntBASIC14.62□□□□□ -0.07
TLR4O00206 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TLR4O00206 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TLR4O00206 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.61□□□□□ -0.07
TLR4O00206 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TLR4O00206 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TLR4O00206 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TLR4O00206 FAM90A7P-201ENST00000382628 1395 ntBASIC14.61□□□□□ -0.07
TLR4O00206 FAM90A23P-201ENST00000400136 1395 ntBASIC14.61□□□□□ -0.07
TLR4O00206 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TLR4O00206 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TLR4O00206 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TLR4O00206 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.61□□□□□ -0.07
TLR4O00206 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TLR4O00206 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.61□□□□□ -0.07
TLR4O00206 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TLR4O00206 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.61□□□□□ -0.07
TLR4O00206 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TLR4O00206 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.61□□□□□ -0.07
TLR4O00206 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.61□□□□□ -0.07
TLR4O00206 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TLR4O00206 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.61□□□□□ -0.07
TLR4O00206 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TLR4O00206 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TLR4O00206 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
TLR4O00206 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TLR4O00206 ISCA2P1-201ENST00000425548 448 ntBASIC14.61□□□□□ -0.07
TLR4O00206 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TLR4O00206 AC234782.1-201ENST00000451950 919 ntBASIC14.61□□□□□ -0.07
TLR4O00206 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.61□□□□□ -0.07
TLR4O00206 RPS2P36-201ENST00000456516 831 ntBASIC14.61□□□□□ -0.07
TLR4O00206 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.61□□□□□ -0.07
TLR4O00206 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC14.61□□□□□ -0.07
TLR4O00206 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
TLR4O00206 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.61□□□□□ -0.07
TLR4O00206 PRKXP1-201ENST00000561423 1122 ntBASIC14.61□□□□□ -0.07
TLR4O00206 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.61□□□□□ -0.07
TLR4O00206 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TLR4O00206 AC005962.1-201ENST00000584100 773 ntBASIC14.61□□□□□ -0.07
TLR4O00206 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC14.61□□□□□ -0.07
TLR4O00206 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.61□□□□□ -0.07
TLR4O00206 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
TLR4O00206 AC023024.2-201ENST00000623561 1993 ntBASIC14.61□□□□□ -0.07
TLR4O00206 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.61□□□□□ -0.07
TLR4O00206 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TLR4O00206 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TLR4O00206 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TLR4O00206 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.61□□□□□ -0.07
TLR4O00206 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TLR4O00206 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TLR4O00206 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TLR4O00206 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms