Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 DNAJB3-201ENST00000446806 729 ntBASIC12.86□□□□□ -0.35
SHISA3A0PJX4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.86□□□□□ -0.35
SHISA3A0PJX4 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.86□□□□□ -0.35
SHISA3A0PJX4 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 TLE1P1-201ENST00000422965 589 ntBASIC12.85□□□□□ -0.35
SHISA3A0PJX4 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 AC023141.5-201ENST00000458585 616 ntBASIC12.85□□□□□ -0.35
SHISA3A0PJX4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 SORD2P-201ENST00000558556 1069 ntBASIC12.85□□□□□ -0.35
SHISA3A0PJX4 MIR3687-2-201ENST00000577708 61 ntBASIC12.85□□□□□ -0.35
SHISA3A0PJX4 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 MIR3687-1-201ENST00000614492 61 ntBASIC12.85□□□□□ -0.35
SHISA3A0PJX4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms