Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
HLA-DRB4X5D2U9 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC11.21□□□□□ -0.62
HLA-DRB4X5D2U9 AL023775.1-201ENST00000454907 1746 ntBASIC11.21□□□□□ -0.62
HLA-DRB4X5D2U9 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 LINC01230-201ENST00000625222 3017 ntBASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 AC018665.1-201ENST00000622927 1362 ntBASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 AC012441.1-201ENST00000446669 685 ntBASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 AC068587.3-201ENST00000526613 355 ntBASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 TDH-203ENST00000531764 1110 ntBASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 POLE2-203ENST00000553805 496 ntTSL 2 BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 MIR5189-201ENST00000577370 114 ntBASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 AC010319.3-201ENST00000597028 470 ntBASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 AC023090.2-201ENST00000625182 2110 ntBASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 AC018442.1-201ENST00000421439 2061 ntBASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
HLA-DRB4X5D2U9 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 AC027612.1-201ENST00000445234 2395 ntBASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms