Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 AC006033.2-201ENST00000609522 1968 ntTSL 2 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 ERBB2-219ENST00000584601 4792 ntTSL 2 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 DPF2-202ENST00000415073 2085 ntTSL 2 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 SEMA3F-206ENST00000434342 3541 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 RCAN1-214ENST00000620920 2257 ntTSL 4 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 P2RX1-201ENST00000225538 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 DPP3-215ENST00000541961 2676 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 ZMIZ2-215ENST00000615423 2772 ntTSL 5 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 GRM4-204ENST00000535756 6670 ntTSL 5 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 AC106820.4-201ENST00000561847 5616 ntBASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 FUT8-204ENST00000394586 3559 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 BTBD9-201ENST00000314100 8486 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
LINC01558Q9Y6Z2 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
LINC01558Q9Y6Z2 KRT18P22-201ENST00000402024 1347 ntBASIC7.52□□□□□ -1.2
LINC01558Q9Y6Z2 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.2
LINC01558Q9Y6Z2 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
LINC01558Q9Y6Z2 EDRF1-201ENST00000337623 4387 ntAPPRIS P3 TSL 5 BASIC7.52□□□□□ -1.2
LINC01558Q9Y6Z2 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC7.52□□□□□ -1.2
LINC01558Q9Y6Z2 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
LINC01558Q9Y6Z2 HPD-204ENST00000543163 1709 ntTSL 5 BASIC7.52□□□□□ -1.2
LINC01558Q9Y6Z2 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC7.52□□□□□ -1.2
LINC01558Q9Y6Z2 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC7.52□□□□□ -1.2
LINC01558Q9Y6Z2 CRBN-215ENST00000639284 2223 ntTSL 5 BASIC7.52□□□□□ -1.2
LINC01558Q9Y6Z2 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 IKBKE-203ENST00000581977 3221 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 HEY2-202ENST00000368365 2461 ntTSL 2 BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 ITGB6-204ENST00000409967 2292 ntTSL 3 BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 SARS-202ENST00000369923 1882 ntTSL 5 BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 AL359641.1-201ENST00000412509 1558 ntBASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 AC093724.1-201ENST00000448659 1027 ntBASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 AC091874.3-201ENST00000512672 1195 ntBASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 DGCR10-201ENST00000609839 495 ntBASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 REXO1L3P-201ENST00000622202 1288 ntBASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 CADM3-202ENST00000368125 3745 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 PLEKHG3-201ENST00000247226 10351 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 FGF23-201ENST00000237837 3018 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 AC090136.3-201ENST00000520834 2704 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 MYT1-203ENST00000536311 5614 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 AC090114.2-201ENST00000608477 7054 ntBASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 NR1I2-202ENST00000393716 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 AKAP1-208ENST00000572557 3098 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 HPGD-214ENST00000542498 2786 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 PRKAG1-205ENST00000547306 1531 ntTSL 5 BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 RAB10-201ENST00000264710 3535 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 PLEC-201ENST00000322810 15249 ntAPPRIS P4 TSL 1 (best) BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 KRT8P35-201ENST00000483942 1338 ntBASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 AL590787.1-201ENST00000568856 1315 ntBASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 PLEKHA2-209ENST00000617275 5582 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
LINC01558Q9Y6Z2 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 SLFNL1-202ENST00000359345 4310 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 MFAP4-201ENST00000299610 1873 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 MFAP4-203ENST00000497081 1876 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 PTPN1-201ENST00000371621 4008 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 PRKCQ-201ENST00000263125 3285 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 ACADL-201ENST00000233710 2543 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 HECTD3-201ENST00000372168 2530 ntTSL 2 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 AC015909.3-201ENST00000572855 1794 ntBASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms