Protein–RNA interactions for Protein: Q9Y4D8

HECTD4, Probable E3 ubiquitin-protein ligase HECTD4, humanhuman

Predictions only

Length 3,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HECTD4Q9Y4D8 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 SIRPB3P-201ENST00000340424 1216 ntBASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 AC006372.4-201ENST00000624122 1543 ntBASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 TCAF2P1-201ENST00000291129 2421 ntBASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 RN7SL523P-201ENST00000484401 298 ntBASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 DLK1-205ENST00000556051 469 ntTSL 2 BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC9.38□□□□□ -0.91
HECTD4Q9Y4D8 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 AL354702.1-201ENST00000442006 1960 ntBASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 AL136172.1-201ENST00000598590 1394 ntBASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 RPL4P6-201ENST00000438116 1304 ntBASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 THAP4-203ENST00000402545 833 ntTSL 5 BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 IFNWP2-201ENST00000431203 580 ntBASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 DUX4L50-201ENST00000455245 715 ntBASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 AC025594.1-201ENST00000469533 543 ntBASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 VENTXP3-201ENST00000546480 773 ntBASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 GAS7-216ENST00000583882 553 ntTSL 5 BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 AC106782.5-201ENST00000616011 337 ntBASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 SARS-202ENST00000369923 1882 ntTSL 5 BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
HECTD4Q9Y4D8 GSN-209ENST00000449733 2702 ntTSL 2 BASIC9.37□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms