Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 C20orf181-201ENST00000623918 480 ntBASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 CYP2AB1P-202ENST00000454440 1456 ntBASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
SND1-IT1Q9HBX3 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 MX1-218ENST00000619682 1980 ntTSL 5 BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 NUTM2HP-201ENST00000442076 2498 ntBASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 INVS-201ENST00000262456 2968 ntTSL 5 BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 AC015922.1-201ENST00000421102 1152 ntBASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 MCCD1P2-201ENST00000423228 335 ntBASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 KRT126P-201ENST00000549467 1181 ntBASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 AC007967.4-201ENST00000614700 386 ntBASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 Z97205.2-201ENST00000564697 1639 ntBASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
SND1-IT1Q9HBX3 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC9.95□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms