Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.16■□□□□ 0.02
SP110Q9HB58 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SP110Q9HB58 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.16■□□□□ 0.02
SP110Q9HB58 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SP110Q9HB58 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SP110Q9HB58 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.16■□□□□ 0.02
SP110Q9HB58 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
SP110Q9HB58 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.16■□□□□ 0.02
SP110Q9HB58 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.16■□□□□ 0.02
SP110Q9HB58 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SP110Q9HB58 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SP110Q9HB58 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SP110Q9HB58 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SP110Q9HB58 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SP110Q9HB58 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SP110Q9HB58 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SP110Q9HB58 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SP110Q9HB58 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SP110Q9HB58 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SP110Q9HB58 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
SP110Q9HB58 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SP110Q9HB58 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SP110Q9HB58 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SP110Q9HB58 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SP110Q9HB58 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SP110Q9HB58 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.15■□□□□ 0.02
SP110Q9HB58 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SP110Q9HB58 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SP110Q9HB58 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SP110Q9HB58 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SP110Q9HB58 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SP110Q9HB58 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SP110Q9HB58 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.15■□□□□ 0.02
SP110Q9HB58 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SP110Q9HB58 ALG3P1-201ENST00000508806 1114 ntBASIC15.15■□□□□ 0.02
SP110Q9HB58 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.15■□□□□ 0.02
SP110Q9HB58 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.15■□□□□ 0.02
SP110Q9HB58 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.15■□□□□ 0.02
SP110Q9HB58 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.15■□□□□ 0.02
SP110Q9HB58 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SP110Q9HB58 BX088702.1-201ENST00000610784 235 ntBASIC15.15■□□□□ 0.02
SP110Q9HB58 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.15■□□□□ 0.02
SP110Q9HB58 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SP110Q9HB58 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.15■□□□□ 0.02
SP110Q9HB58 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SP110Q9HB58 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SP110Q9HB58 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SP110Q9HB58 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.15■□□□□ 0.02
SP110Q9HB58 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SP110Q9HB58 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SP110Q9HB58 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SP110Q9HB58 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC15.14■□□□□ 0.01
SP110Q9HB58 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SP110Q9HB58 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
SP110Q9HB58 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.14■□□□□ 0.01
SP110Q9HB58 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SP110Q9HB58 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SP110Q9HB58 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.14■□□□□ 0.01
SP110Q9HB58 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.14■□□□□ 0.01
SP110Q9HB58 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SP110Q9HB58 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SP110Q9HB58 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.14■□□□□ 0.01
SP110Q9HB58 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SP110Q9HB58 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SP110Q9HB58 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SP110Q9HB58 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SP110Q9HB58 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.14■□□□□ 0.01
SP110Q9HB58 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.14■□□□□ 0.01
SP110Q9HB58 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.14■□□□□ 0.01
SP110Q9HB58 PUDPP3-201ENST00000445368 636 ntBASIC15.14■□□□□ 0.01
SP110Q9HB58 HIST2H2BB-201ENST00000449108 381 ntBASIC15.14■□□□□ 0.01
SP110Q9HB58 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SP110Q9HB58 BNIP3P42-201ENST00000454982 569 ntBASIC15.14■□□□□ 0.01
SP110Q9HB58 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SP110Q9HB58 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.14■□□□□ 0.01
SP110Q9HB58 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.14■□□□□ 0.01
SP110Q9HB58 MIR4741-201ENST00000579822 90 ntBASIC15.14■□□□□ 0.01
SP110Q9HB58 AC010328.2-201ENST00000597698 1111 ntBASIC15.14■□□□□ 0.01
SP110Q9HB58 BNIP3P29-201ENST00000598302 571 ntBASIC15.14■□□□□ 0.01
SP110Q9HB58 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SP110Q9HB58 AL358472.3-201ENST00000608147 415 ntBASIC15.14■□□□□ 0.01
SP110Q9HB58 AL136301.1-201ENST00000615830 422 ntBASIC15.14■□□□□ 0.01
SP110Q9HB58 AC011447.5-201ENST00000616168 564 ntBASIC15.14■□□□□ 0.01
SP110Q9HB58 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SP110Q9HB58 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SP110Q9HB58 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.14■□□□□ 0.01
SP110Q9HB58 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.14■□□□□ 0.01
SP110Q9HB58 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
SP110Q9HB58 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.14■□□□□ 0.01
SP110Q9HB58 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SP110Q9HB58 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SP110Q9HB58 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SP110Q9HB58 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SP110Q9HB58 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SP110Q9HB58 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
SP110Q9HB58 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SP110Q9HB58 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SP110Q9HB58 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SP110Q9HB58 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
SP110Q9HB58 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms