Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
NKX6-2Q9C056 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NKX6-2Q9C056 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.01□□□□□ -0.49
NKX6-2Q9C056 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC12.01□□□□□ -0.49
NKX6-2Q9C056 NCLP1-201ENST00000445357 1963 ntBASIC12.01□□□□□ -0.49
NKX6-2Q9C056 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NKX6-2Q9C056 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC12.01□□□□□ -0.49
NKX6-2Q9C056 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.01□□□□□ -0.49
NKX6-2Q9C056 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC12.01□□□□□ -0.49
NKX6-2Q9C056 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
NKX6-2Q9C056 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.01□□□□□ -0.49
NKX6-2Q9C056 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NKX6-2Q9C056 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
NKX6-2Q9C056 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
NKX6-2Q9C056 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
NKX6-2Q9C056 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
NKX6-2Q9C056 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NKX6-2Q9C056 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12□□□□□ -0.49
NKX6-2Q9C056 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12□□□□□ -0.49
NKX6-2Q9C056 AC112176.1-201ENST00000565428 3024 ntBASIC12□□□□□ -0.49
NKX6-2Q9C056 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
NKX6-2Q9C056 MAPK10-262ENST00000641051 5738 ntBASIC12□□□□□ -0.49
NKX6-2Q9C056 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NKX6-2Q9C056 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
NKX6-2Q9C056 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12□□□□□ -0.49
NKX6-2Q9C056 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC12□□□□□ -0.49
NKX6-2Q9C056 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12□□□□□ -0.49
NKX6-2Q9C056 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12□□□□□ -0.49
NKX6-2Q9C056 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NKX6-2Q9C056 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NKX6-2Q9C056 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12□□□□□ -0.49
NKX6-2Q9C056 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NKX6-2Q9C056 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NKX6-2Q9C056 AC092053.3-201ENST00000641308 4975 ntBASIC12□□□□□ -0.49
NKX6-2Q9C056 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12□□□□□ -0.49
NKX6-2Q9C056 AL354702.1-201ENST00000442006 1960 ntBASIC12□□□□□ -0.49
NKX6-2Q9C056 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
NKX6-2Q9C056 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC12□□□□□ -0.49
NKX6-2Q9C056 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
NKX6-2Q9C056 DDX12P-201ENST00000432996 2947 ntBASIC12□□□□□ -0.49
NKX6-2Q9C056 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC12□□□□□ -0.49
NKX6-2Q9C056 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
NKX6-2Q9C056 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
NKX6-2Q9C056 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC12□□□□□ -0.49
NKX6-2Q9C056 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC12□□□□□ -0.49
NKX6-2Q9C056 AC136604.1-202ENST00000425471 771 ntBASIC12□□□□□ -0.49
NKX6-2Q9C056 GHSR-202ENST00000427970 912 ntBASIC12□□□□□ -0.49
NKX6-2Q9C056 RPS2P1-201ENST00000434010 821 ntBASIC12□□□□□ -0.49
NKX6-2Q9C056 AC140658.5-201ENST00000438532 169 ntBASIC12□□□□□ -0.49
NKX6-2Q9C056 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC12□□□□□ -0.49
NKX6-2Q9C056 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC12□□□□□ -0.49
NKX6-2Q9C056 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC12□□□□□ -0.49
NKX6-2Q9C056 NMU-203ENST00000507338 658 ntTSL 3 BASIC12□□□□□ -0.49
NKX6-2Q9C056 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12□□□□□ -0.49
NKX6-2Q9C056 AC091304.2-201ENST00000564639 760 ntBASIC12□□□□□ -0.49
NKX6-2Q9C056 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC12□□□□□ -0.49
NKX6-2Q9C056 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
NKX6-2Q9C056 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12□□□□□ -0.49
NKX6-2Q9C056 AC007064.4-201ENST00000637740 555 ntBASIC12□□□□□ -0.49
NKX6-2Q9C056 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NKX6-2Q9C056 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC12□□□□□ -0.49
NKX6-2Q9C056 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
NKX6-2Q9C056 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NKX6-2Q9C056 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC12□□□□□ -0.49
NKX6-2Q9C056 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12□□□□□ -0.49
NKX6-2Q9C056 PNPLA8-208ENST00000453144 3366 ntTSL 1 (best) BASIC12□□□□□ -0.49
NKX6-2Q9C056 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC12□□□□□ -0.49
NKX6-2Q9C056 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC12□□□□□ -0.49
NKX6-2Q9C056 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC12□□□□□ -0.49
NKX6-2Q9C056 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12□□□□□ -0.49
NKX6-2Q9C056 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NKX6-2Q9C056 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
NKX6-2Q9C056 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
NKX6-2Q9C056 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NKX6-2Q9C056 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12□□□□□ -0.49
NKX6-2Q9C056 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
NKX6-2Q9C056 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC12□□□□□ -0.49
NKX6-2Q9C056 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12□□□□□ -0.49
NKX6-2Q9C056 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 AC135782.3-201ENST00000562782 2105 ntBASIC11.99□□□□□ -0.49
NKX6-2Q9C056 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 DDT-204ENST00000404092 805 ntTSL 3 BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 COPS8-203ENST00000409334 794 ntTSL 5 BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
NKX6-2Q9C056 FALEC-201ENST00000416894 566 ntTSL 3 BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms