Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
PCDH11XQ9BZA7 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDH11XQ9BZA7 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDH11XQ9BZA7 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PCDH11XQ9BZA7 LINC00554-201ENST00000564841 3011 ntBASIC18.79■□□□□ 0.6
PCDH11XQ9BZA7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH11XQ9BZA7 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDH11XQ9BZA7 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH11XQ9BZA7 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH11XQ9BZA7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PCDH11XQ9BZA7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH11XQ9BZA7 AC018442.1-201ENST00000421439 2061 ntBASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 PPP1R2P4-201ENST00000424051 595 ntBASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 SCARNA12-201ENST00000459155 270 ntBASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 PPOX-204ENST00000462866 473 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDH11XQ9BZA7 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH11XQ9BZA7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDH11XQ9BZA7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PCDH11XQ9BZA7 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH11XQ9BZA7 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH11XQ9BZA7 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH11XQ9BZA7 AL161932.2-201ENST00000435436 679 ntBASIC18.77■□□□□ 0.6
PCDH11XQ9BZA7 RN7SL23P-201ENST00000484055 275 ntBASIC18.77■□□□□ 0.6
PCDH11XQ9BZA7 AC093909.3-201ENST00000504783 336 ntBASIC18.77■□□□□ 0.6
PCDH11XQ9BZA7 SORD2P-201ENST00000558556 1069 ntBASIC18.77■□□□□ 0.6
PCDH11XQ9BZA7 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC18.77■□□□□ 0.6
PCDH11XQ9BZA7 AC011471.3-201ENST00000623576 402 ntBASIC18.77■□□□□ 0.6
PCDH11XQ9BZA7 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH11XQ9BZA7 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDH11XQ9BZA7 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH11XQ9BZA7 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PCDH11XQ9BZA7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH11XQ9BZA7 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH11XQ9BZA7 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PCDH11XQ9BZA7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH11XQ9BZA7 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH11XQ9BZA7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH11XQ9BZA7 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH11XQ9BZA7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PCDH11XQ9BZA7 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDH11XQ9BZA7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDH11XQ9BZA7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
PCDH11XQ9BZA7 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC18.77■□□□□ 0.59
PCDH11XQ9BZA7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC18.77■□□□□ 0.59
PCDH11XQ9BZA7 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PCDH11XQ9BZA7 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC18.77■□□□□ 0.59
PCDH11XQ9BZA7 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH11XQ9BZA7 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDH11XQ9BZA7 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH11XQ9BZA7 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDH11XQ9BZA7 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDH11XQ9BZA7 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDH11XQ9BZA7 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC18.76■□□□□ 0.59
PCDH11XQ9BZA7 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDH11XQ9BZA7 AC095040.1-201ENST00000513286 675 ntBASIC18.76■□□□□ 0.59
PCDH11XQ9BZA7 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC18.76■□□□□ 0.59
PCDH11XQ9BZA7 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDH11XQ9BZA7 AC244250.3-201ENST00000620749 366 ntBASIC18.76■□□□□ 0.59
PCDH11XQ9BZA7 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDH11XQ9BZA7 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH11XQ9BZA7 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH11XQ9BZA7 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDH11XQ9BZA7 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
PCDH11XQ9BZA7 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.76■□□□□ 0.59
PCDH11XQ9BZA7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH11XQ9BZA7 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms