Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 AC091769.1-201ENST00000619576 568 ntBASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 AL445675.1-201ENST00000603868 1410 ntBASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 AC011270.2-201ENST00000624293 2550 ntBASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 CD300LB-201ENST00000314401 993 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 AC130710.1-201ENST00000412381 642 ntTSL 3 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 AC092573.1-201ENST00000433054 884 ntBASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 AC003958.1-201ENST00000435883 421 ntBASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 AC078776.1-201ENST00000546558 562 ntTSL 4 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 AC084033.3-203ENST00000546580 571 ntTSL 2 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 AC103740.2-201ENST00000557900 1225 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 AC009309.1-201ENST00000610262 460 ntBASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 RUVBL2-212ENST00000627972 1065 ntTSL 5 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 AC008993.1-201ENST00000632280 776 ntBASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 AC067931.2-201ENST00000623655 2003 ntBASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SYNE2Q8WXH0 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 MIR4435-2HG-212ENST00000444301 666 ntTSL 3 BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 AC008937.1-201ENST00000453721 914 ntTSL 3 BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 TSACC-206ENST00000466306 477 ntTSL 3 BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 AC022634.2-201ENST00000521504 382 ntTSL 3 BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 AL133372.2-202ENST00000549360 768 ntTSL 3 BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 ZNF551-202ENST00000596085 469 ntTSL 2 BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 AL078645.2-201ENST00000245811 1325 ntBASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 AL118505.1-201ENST00000619370 1932 ntBASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 AC005037.1-202ENST00000332935 820 ntTSL 3 BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 APH1B-203ENST00000380343 685 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 C9orf147-203ENST00000460965 446 ntTSL 3 BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 AC025165.4-201ENST00000602327 433 ntBASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 RAB5B-211ENST00000628569 496 ntTSL 5 BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 TBP-201ENST00000230354 1861 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 AC106799.1-201ENST00000503188 1676 ntTSL 2 BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 AC044802.2-201ENST00000551187 434 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 AC091027.2-201ENST00000578030 179 ntTSL 5 BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 KLK13-207ENST00000596955 737 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 MIR6737-201ENST00000617385 70 ntBASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 SLC28A1-202ENST00000338602 1360 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 R3HDM2P2-201ENST00000401880 2116 ntBASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 GNAS-209ENST00000371081 730 ntTSL 2 BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 RCL1-203ENST00000381732 804 ntTSL 2 BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC5.7□□□□□ -1.5
SYNE2Q8WXH0 AC022217.2-201ENST00000518941 472 ntTSL 2 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms