Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 MIR4525-201ENST00000580000 75 ntBASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 AC244157.2-201ENST00000616239 1006 ntBASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 MIR6869-201ENST00000619434 62 ntBASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 LINC00528-201ENST00000600723 2160 ntBASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 AL138725.1-201ENST00000407347 1314 ntBASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 AC003102.2-201ENST00000589195 1469 ntBASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 SALL4P5-201ENST00000419001 1760 ntBASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
FNDC9Q8TBE3 AC007686.3-201ENST00000619017 3487 ntBASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 AC005695.3-201ENST00000614522 232 ntBASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 AL096828.3-201ENST00000615354 462 ntBASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 AC002472.3-201ENST00000640124 621 ntBASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
FNDC9Q8TBE3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
FNDC9Q8TBE3 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
FNDC9Q8TBE3 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
FNDC9Q8TBE3 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
FNDC9Q8TBE3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
FNDC9Q8TBE3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.33□□□□□ -0.27
FNDC9Q8TBE3 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.33□□□□□ -0.27
FNDC9Q8TBE3 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.27
FNDC9Q8TBE3 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
FNDC9Q8TBE3 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
FNDC9Q8TBE3 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.27
FNDC9Q8TBE3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
FNDC9Q8TBE3 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.33□□□□□ -0.28
FNDC9Q8TBE3 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms