Protein–RNA interactions for Protein: Q8IYB3

SRRM1, Serine/arginine repetitive matrix protein 1, humanhuman

Known RBP Predictions only

Length 904 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1Q8IYB3 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM1Q8IYB3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
SRRM1Q8IYB3 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.11■□□□□ 0.01
SRRM1Q8IYB3 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM1Q8IYB3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.11■□□□□ 0.01
SRRM1Q8IYB3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.11■□□□□ 0.01
SRRM1Q8IYB3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM1Q8IYB3 AC000095.1-201ENST00000603208 874 ntBASIC15.11■□□□□ 0.01
SRRM1Q8IYB3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM1Q8IYB3 AC020910.6-201ENST00000623084 1459 ntBASIC15.11■□□□□ 0.01
SRRM1Q8IYB3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM1Q8IYB3 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.11■□□□□ 0.01
SRRM1Q8IYB3 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SRRM1Q8IYB3 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SRRM1Q8IYB3 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM1Q8IYB3 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM1Q8IYB3 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM1Q8IYB3 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM1Q8IYB3 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM1Q8IYB3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM1Q8IYB3 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM1Q8IYB3 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM1Q8IYB3 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.11■□□□□ 0.01
SRRM1Q8IYB3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM1Q8IYB3 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM1Q8IYB3 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM1Q8IYB3 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SRRM1Q8IYB3 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 HLA-K-203ENST00000430151 1046 ntBASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 CR383656.12-201ENST00000549567 513 ntBASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SRRM1Q8IYB3 AC023794.5-201ENST00000564380 2157 ntBASIC15.09■□□□□ 0.01
SRRM1Q8IYB3 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM1Q8IYB3 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.09■□□□□ 0.01
SRRM1Q8IYB3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.09■□□□□ 0.01
SRRM1Q8IYB3 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC15.09■□□□□ 0.01
SRRM1Q8IYB3 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM1Q8IYB3 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC15.09■□□□□ 0.01
SRRM1Q8IYB3 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC15.09■□□□□ 0.01
SRRM1Q8IYB3 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM1Q8IYB3 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
SRRM1Q8IYB3 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM1Q8IYB3 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM1Q8IYB3 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC15.09■□□□□ 0.01
SRRM1Q8IYB3 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM1Q8IYB3 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC15.09■□□□□ 0.01
SRRM1Q8IYB3 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SRRM1Q8IYB3 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM1Q8IYB3 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM1Q8IYB3 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.09■□□□□ 0.01
SRRM1Q8IYB3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM1Q8IYB3 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM1Q8IYB3 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SRRM1Q8IYB3 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM1Q8IYB3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SRRM1Q8IYB3 TCAM1P-207ENST00000485295 1537 ntBASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms