Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 UNC93B7-201ENST00000509439 705 ntBASIC12.33□□□□□ -0.44
ZNF546Q86UE3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 RNA5SP415-201ENST00000517246 115 ntBASIC12.33□□□□□ -0.44
ZNF546Q86UE3 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 KRT19P2-202ENST00000557173 1012 ntBASIC12.33□□□□□ -0.44
ZNF546Q86UE3 RARRES2P8-201ENST00000566335 367 ntBASIC12.33□□□□□ -0.44
ZNF546Q86UE3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 AC074044.1-201ENST00000609673 707 ntBASIC12.33□□□□□ -0.44
ZNF546Q86UE3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.33□□□□□ -0.44
ZNF546Q86UE3 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 CICP1-201ENST00000416803 2410 ntBASIC12.32□□□□□ -0.44
ZNF546Q86UE3 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 NCLP1-201ENST00000445357 1963 ntBASIC12.32□□□□□ -0.44
ZNF546Q86UE3 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 DLX4-206ENST00000611342 1662 ntBASIC12.32□□□□□ -0.44
ZNF546Q86UE3 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 CLK3P2-201ENST00000427566 1453 ntBASIC12.32□□□□□ -0.44
ZNF546Q86UE3 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ZNF546Q86UE3 AC011840.2-201ENST00000563063 1520 ntBASIC12.32□□□□□ -0.44
ZNF546Q86UE3 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
ZNF546Q86UE3 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms