Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 FES-204ENST00000414248 2327 ntTSL 2 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13CQ709C8 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13CQ709C8 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13CQ709C8 PTGER4P2-201ENST00000328411 252 ntBASIC11.91□□□□□ -0.5
VPS13CQ709C8 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 PGAM1P11-201ENST00000416729 680 ntBASIC11.91□□□□□ -0.5
VPS13CQ709C8 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 PTGER4P3-201ENST00000458150 252 ntBASIC11.91□□□□□ -0.5
VPS13CQ709C8 RN7SL578P-201ENST00000477781 283 ntBASIC11.91□□□□□ -0.5
VPS13CQ709C8 AC095040.1-201ENST00000513286 675 ntBASIC11.91□□□□□ -0.5
VPS13CQ709C8 AC090386.2-201ENST00000623010 1039 ntBASIC11.91□□□□□ -0.5
VPS13CQ709C8 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13CQ709C8 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13CQ709C8 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13CQ709C8 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
VPS13CQ709C8 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13CQ709C8 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13CQ709C8 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
VPS13CQ709C8 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC11.9□□□□□ -0.5
VPS13CQ709C8 RPS23-207ENST00000511844 530 ntTSL 2 BASIC11.9□□□□□ -0.5
VPS13CQ709C8 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC11.9□□□□□ -0.5
VPS13CQ709C8 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC11.9□□□□□ -0.5
VPS13CQ709C8 AC005274.1-201ENST00000623460 802 ntBASIC11.9□□□□□ -0.5
VPS13CQ709C8 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC11.9□□□□□ -0.5
VPS13CQ709C8 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC11.9□□□□□ -0.5
VPS13CQ709C8 AL109954.1-202ENST00000564051 2148 ntBASIC11.9□□□□□ -0.5
VPS13CQ709C8 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
VPS13CQ709C8 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC11.9□□□□□ -0.5
VPS13CQ709C8 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13CQ709C8 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
VPS13CQ709C8 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13CQ709C8 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13CQ709C8 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13CQ709C8 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC11.9□□□□□ -0.5
VPS13CQ709C8 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC11.9□□□□□ -0.5
VPS13CQ709C8 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC11.9□□□□□ -0.5
VPS13CQ709C8 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC11.9□□□□□ -0.5
VPS13CQ709C8 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
VPS13CQ709C8 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC11.9□□□□□ -0.5
VPS13CQ709C8 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
VPS13CQ709C8 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13CQ709C8 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13CQ709C8 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
VPS13CQ709C8 LAP3P2-201ENST00000454686 1454 ntBASIC11.9□□□□□ -0.5
VPS13CQ709C8 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13CQ709C8 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC11.9□□□□□ -0.5
VPS13CQ709C8 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
VPS13CQ709C8 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
VPS13CQ709C8 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC11.9□□□□□ -0.51
VPS13CQ709C8 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
VPS13CQ709C8 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC11.9□□□□□ -0.51
VPS13CQ709C8 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC11.9□□□□□ -0.51
VPS13CQ709C8 AC011498.7-201ENST00000624986 2027 ntBASIC11.9□□□□□ -0.51
VPS13CQ709C8 RN7SL128P-201ENST00000467883 305 ntBASIC11.9□□□□□ -0.51
VPS13CQ709C8 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC11.9□□□□□ -0.51
VPS13CQ709C8 AC103702.1-201ENST00000548801 2630 ntBASIC11.9□□□□□ -0.51
VPS13CQ709C8 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
VPS13CQ709C8 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13CQ709C8 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC11.89□□□□□ -0.51
VPS13CQ709C8 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13CQ709C8 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
VPS13CQ709C8 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13CQ709C8 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13CQ709C8 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
VPS13CQ709C8 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13CQ709C8 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13CQ709C8 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC11.89□□□□□ -0.51
VPS13CQ709C8 NME6-208ENST00000435684 599 ntTSL 2 BASIC11.89□□□□□ -0.51
VPS13CQ709C8 AC005740.1-201ENST00000515639 522 ntBASIC11.89□□□□□ -0.51
VPS13CQ709C8 AC068831.5-201ENST00000557387 328 ntBASIC11.89□□□□□ -0.51
VPS13CQ709C8 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC11.89□□□□□ -0.51
VPS13CQ709C8 AC142086.5-202ENST00000562500 217 ntBASIC11.89□□□□□ -0.51
VPS13CQ709C8 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13CQ709C8 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13CQ709C8 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
VPS13CQ709C8 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13CQ709C8 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13CQ709C8 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13CQ709C8 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
VPS13CQ709C8 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
VPS13CQ709C8 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC11.89□□□□□ -0.51
VPS13CQ709C8 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC11.89□□□□□ -0.51
VPS13CQ709C8 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13CQ709C8 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13CQ709C8 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
VPS13CQ709C8 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13CQ709C8 MYB-242ENST00000618728 3545 ntTSL 5 BASIC11.89□□□□□ -0.51
VPS13CQ709C8 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC11.89□□□□□ -0.51
VPS13CQ709C8 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13CQ709C8 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC11.89□□□□□ -0.51
VPS13CQ709C8 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC11.89□□□□□ -0.51
VPS13CQ709C8 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC11.89□□□□□ -0.51
VPS13CQ709C8 RNLS-203ENST00000437752 525 ntTSL 2 BASIC11.89□□□□□ -0.51
VPS13CQ709C8 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC11.89□□□□□ -0.51
VPS13CQ709C8 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms