Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 MTHFR-210ENST00000641407 2387 ntBASIC12.3□□□□□ -0.44
TREML4Q6UXN2 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 AC006504.5-208ENST00000588784 2401 ntBASIC12.3□□□□□ -0.44
TREML4Q6UXN2 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 AC015656.1-201ENST00000624209 3578 ntBASIC12.3□□□□□ -0.44
TREML4Q6UXN2 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 CAB39P1-201ENST00000502277 460 ntBASIC12.3□□□□□ -0.44
TREML4Q6UXN2 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 ZNF767P-206ENST00000513792 565 ntBASIC12.3□□□□□ -0.44
TREML4Q6UXN2 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 AC068587.3-201ENST00000526613 355 ntBASIC12.3□□□□□ -0.44
TREML4Q6UXN2 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 AC084759.2-202ENST00000557976 1053 ntTSL 5 BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 AP000845.1-201ENST00000581677 2131 ntBASIC12.3□□□□□ -0.44
TREML4Q6UXN2 AC025048.3-201ENST00000590609 569 ntBASIC12.3□□□□□ -0.44
TREML4Q6UXN2 AC011447.3-205ENST00000592022 1268 ntTSL 3 BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 AC016252.1-201ENST00000609721 474 ntBASIC12.3□□□□□ -0.44
TREML4Q6UXN2 AC005702.4-201ENST00000618393 416 ntBASIC12.3□□□□□ -0.44
TREML4Q6UXN2 AC023510.2-201ENST00000622162 746 ntBASIC12.3□□□□□ -0.44
TREML4Q6UXN2 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TREML4Q6UXN2 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TREML4Q6UXN2 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TREML4Q6UXN2 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TREML4Q6UXN2 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TREML4Q6UXN2 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.29□□□□□ -0.44
TREML4Q6UXN2 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.29□□□□□ -0.44
TREML4Q6UXN2 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
TREML4Q6UXN2 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TREML4Q6UXN2 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TREML4Q6UXN2 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TREML4Q6UXN2 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TREML4Q6UXN2 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TREML4Q6UXN2 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.29□□□□□ -0.44
TREML4Q6UXN2 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
TREML4Q6UXN2 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TREML4Q6UXN2 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
TREML4Q6UXN2 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TREML4Q6UXN2 AC027601.5-201ENST00000624065 2482 ntBASIC12.29□□□□□ -0.44
TREML4Q6UXN2 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TREML4Q6UXN2 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
TREML4Q6UXN2 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
TREML4Q6UXN2 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
TREML4Q6UXN2 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TREML4Q6UXN2 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TREML4Q6UXN2 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TREML4Q6UXN2 GHSR-202ENST00000427970 912 ntBASIC12.29□□□□□ -0.44
TREML4Q6UXN2 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.29□□□□□ -0.44
TREML4Q6UXN2 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC12.29□□□□□ -0.44
TREML4Q6UXN2 PQLC2L-206ENST00000468043 883 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
TREML4Q6UXN2 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC12.29□□□□□ -0.44
TREML4Q6UXN2 AC016550.1-201ENST00000505348 785 ntBASIC12.29□□□□□ -0.44
TREML4Q6UXN2 AC025244.1-201ENST00000505930 469 ntTSL 3 BASIC12.29□□□□□ -0.44
TREML4Q6UXN2 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms