Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 TRMT112P3-201ENST00000580149 358 ntBASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RSPO4Q2I0M5 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 AL136172.1-201ENST00000598590 1394 ntBASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 CASP2-203ENST00000392925 616 ntTSL 3 BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 DKKL1P1-201ENST00000400550 698 ntBASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 CELP-201ENST00000411440 1249 ntTSL 5 BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 AC027612.2-202ENST00000445955 1199 ntBASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 AC018638.5-201ENST00000450885 754 ntBASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 IGHEP2-201ENST00000519308 1256 ntBASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 APOC1-209ENST00000592885 562 ntTSL 3 BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 AC006372.4-201ENST00000624122 1543 ntBASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 LINC02447-202ENST00000501888 2146 ntBASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RSPO4Q2I0M5 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 FAU-201ENST00000279259 461 ntTSL 2 BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 AC053503.3-201ENST00000448375 114 ntBASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 AC012183.1-201ENST00000625197 499 ntBASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RSPO4Q2I0M5 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms