Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL16A1Q07092 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.07■□□□□ 0.64
COL16A1Q07092 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL16A1Q07092 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC19.07■□□□□ 0.64
COL16A1Q07092 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.07■□□□□ 0.64
COL16A1Q07092 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL16A1Q07092 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
COL16A1Q07092 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC19.07■□□□□ 0.64
COL16A1Q07092 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
COL16A1Q07092 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
COL16A1Q07092 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC19.07■□□□□ 0.64
COL16A1Q07092 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL16A1Q07092 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC19.07■□□□□ 0.64
COL16A1Q07092 AC139100.2-201ENST00000616901 662 ntBASIC19.07■□□□□ 0.64
COL16A1Q07092 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL16A1Q07092 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
COL16A1Q07092 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL16A1Q07092 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL16A1Q07092 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
COL16A1Q07092 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.06■□□□□ 0.64
COL16A1Q07092 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL16A1Q07092 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL16A1Q07092 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL16A1Q07092 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC19.06■□□□□ 0.64
COL16A1Q07092 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL16A1Q07092 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC19.06■□□□□ 0.64
COL16A1Q07092 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL16A1Q07092 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.06■□□□□ 0.64
COL16A1Q07092 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL16A1Q07092 POP5-201ENST00000341039 913 ntTSL 2 BASIC19.06■□□□□ 0.64
COL16A1Q07092 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL16A1Q07092 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
COL16A1Q07092 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC19.06■□□□□ 0.64
COL16A1Q07092 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC19.06■□□□□ 0.64
COL16A1Q07092 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
COL16A1Q07092 AC005586.2-201ENST00000563946 837 ntBASIC19.06■□□□□ 0.64
COL16A1Q07092 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC19.06■□□□□ 0.64
COL16A1Q07092 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC19.06■□□□□ 0.64
COL16A1Q07092 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC19.06■□□□□ 0.64
COL16A1Q07092 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC19.06■□□□□ 0.64
COL16A1Q07092 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
COL16A1Q07092 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL16A1Q07092 AC106785.2-201ENST00000564385 1319 ntBASIC19.06■□□□□ 0.64
COL16A1Q07092 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL16A1Q07092 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL16A1Q07092 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
COL16A1Q07092 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.05■□□□□ 0.64
COL16A1Q07092 AC064850.1-201ENST00000413279 1398 ntBASIC19.05■□□□□ 0.64
COL16A1Q07092 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
COL16A1Q07092 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL16A1Q07092 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
COL16A1Q07092 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL16A1Q07092 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL16A1Q07092 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC19.05■□□□□ 0.64
COL16A1Q07092 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL16A1Q07092 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL16A1Q07092 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL16A1Q07092 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL16A1Q07092 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL16A1Q07092 CRIP1P2-201ENST00000425396 228 ntBASIC19.05■□□□□ 0.64
COL16A1Q07092 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC19.05■□□□□ 0.64
COL16A1Q07092 AC004910.1-201ENST00000433493 787 ntBASIC19.05■□□□□ 0.64
COL16A1Q07092 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC19.05■□□□□ 0.64
COL16A1Q07092 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC19.05■□□□□ 0.64
COL16A1Q07092 ALDOAP1-201ENST00000491506 1078 ntBASIC19.05■□□□□ 0.64
COL16A1Q07092 CCNL2P1-201ENST00000512846 969 ntBASIC19.05■□□□□ 0.64
COL16A1Q07092 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL16A1Q07092 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC19.05■□□□□ 0.64
COL16A1Q07092 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL16A1Q07092 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC19.05■□□□□ 0.64
COL16A1Q07092 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC19.05■□□□□ 0.64
COL16A1Q07092 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC19.05■□□□□ 0.64
COL16A1Q07092 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL16A1Q07092 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL16A1Q07092 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
COL16A1Q07092 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL16A1Q07092 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL16A1Q07092 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
COL16A1Q07092 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC19.05■□□□□ 0.64
COL16A1Q07092 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL16A1Q07092 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC19.05■□□□□ 0.64
COL16A1Q07092 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL16A1Q07092 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL16A1Q07092 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL16A1Q07092 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL16A1Q07092 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.05■□□□□ 0.64
COL16A1Q07092 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL16A1Q07092 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.05■□□□□ 0.64
COL16A1Q07092 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
COL16A1Q07092 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL16A1Q07092 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL16A1Q07092 CCL19-202ENST00000378800 414 ntTSL 2 BASIC19.04■□□□□ 0.64
COL16A1Q07092 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC19.04■□□□□ 0.64
COL16A1Q07092 MPV17-209ENST00000405983 859 ntTSL 5 BASIC19.04■□□□□ 0.64
COL16A1Q07092 HNRNPABP1-201ENST00000406003 734 ntBASIC19.04■□□□□ 0.64
COL16A1Q07092 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC19.04■□□□□ 0.64
COL16A1Q07092 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC19.04■□□□□ 0.64
COL16A1Q07092 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC19.04■□□□□ 0.64
COL16A1Q07092 AC022121.1-201ENST00000484584 579 ntBASIC19.04■□□□□ 0.64
COL16A1Q07092 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms