Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 AC018529.2-202ENST00000611482 3087 ntBASIC11.42□□□□□ -0.58
HIST1H1AQ02539 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC11.42□□□□□ -0.58
HIST1H1AQ02539 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 SLC9A7P1-202ENST00000556476 2239 ntBASIC11.41□□□□□ -0.58
HIST1H1AQ02539 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 AC022144.1-201ENST00000602255 1580 ntBASIC11.41□□□□□ -0.58
HIST1H1AQ02539 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 TSSK5P-201ENST00000423978 907 ntBASIC11.41□□□□□ -0.58
HIST1H1AQ02539 AC055876.3-201ENST00000431496 288 ntBASIC11.41□□□□□ -0.58
HIST1H1AQ02539 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 AC009477.1-201ENST00000452936 217 ntBASIC11.41□□□□□ -0.58
HIST1H1AQ02539 AL589987.1-201ENST00000453380 819 ntBASIC11.41□□□□□ -0.58
HIST1H1AQ02539 SPDYE18-201ENST00000510091 1050 ntBASIC11.41□□□□□ -0.58
HIST1H1AQ02539 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 AC104794.3-201ENST00000566840 1248 ntBASIC11.41□□□□□ -0.58
HIST1H1AQ02539 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 PRR29-204ENST00000577953 565 ntTSL 4 BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 SRD5A3P1-201ENST00000603021 949 ntBASIC11.41□□□□□ -0.58
HIST1H1AQ02539 AC008738.7-201ENST00000609744 511 ntBASIC11.41□□□□□ -0.58
HIST1H1AQ02539 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 AC138649.4-201ENST00000612222 287 ntBASIC11.41□□□□□ -0.58
HIST1H1AQ02539 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 AC015802.1-201ENST00000588104 1449 ntBASIC11.41□□□□□ -0.58
HIST1H1AQ02539 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
HIST1H1AQ02539 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 AL591122.2-201ENST00000624125 1853 ntBASIC11.4□□□□□ -0.58
HIST1H1AQ02539 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 CLK3P2-201ENST00000427566 1453 ntBASIC11.4□□□□□ -0.58
HIST1H1AQ02539 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms