Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
SCN7AQ01118 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC17.81■□□□□ 0.44
SCN7AQ01118 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCN7AQ01118 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC17.81■□□□□ 0.44
SCN7AQ01118 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCN7AQ01118 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCN7AQ01118 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCN7AQ01118 KRT18P4-201ENST00000422599 1288 ntBASIC17.8■□□□□ 0.44
SCN7AQ01118 TPT1P11-201ENST00000458482 498 ntBASIC17.8■□□□□ 0.44
SCN7AQ01118 PRSS3P1-201ENST00000503996 742 ntBASIC17.8■□□□□ 0.44
SCN7AQ01118 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC17.8■□□□□ 0.44
SCN7AQ01118 AL359091.4-201ENST00000610052 409 ntBASIC17.8■□□□□ 0.44
SCN7AQ01118 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCN7AQ01118 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SCN7AQ01118 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC17.8■□□□□ 0.44
SCN7AQ01118 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SCN7AQ01118 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCN7AQ01118 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SCN7AQ01118 MIR1301-201ENST00000408518 82 ntBASIC17.8■□□□□ 0.44
SCN7AQ01118 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SCN7AQ01118 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC17.8■□□□□ 0.44
SCN7AQ01118 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCN7AQ01118 RN7SKP155-201ENST00000516031 288 ntBASIC17.8■□□□□ 0.44
SCN7AQ01118 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCN7AQ01118 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
SCN7AQ01118 AP003392.6-201ENST00000607709 325 ntBASIC17.8■□□□□ 0.44
SCN7AQ01118 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC17.8■□□□□ 0.44
SCN7AQ01118 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC17.8■□□□□ 0.44
SCN7AQ01118 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SCN7AQ01118 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SCN7AQ01118 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SCN7AQ01118 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SCN7AQ01118 AC011498.7-201ENST00000624986 2027 ntBASIC17.8■□□□□ 0.44
SCN7AQ01118 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.8■□□□□ 0.44
SCN7AQ01118 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCN7AQ01118 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCN7AQ01118 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.79■□□□□ 0.44
SCN7AQ01118 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC17.79■□□□□ 0.44
SCN7AQ01118 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SCN7AQ01118 SHMT1P1-201ENST00000419974 1312 ntBASIC17.79■□□□□ 0.44
SCN7AQ01118 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC17.79■□□□□ 0.44
SCN7AQ01118 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCN7AQ01118 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC17.79■□□□□ 0.44
SCN7AQ01118 DUT-208ENST00000559540 1441 ntTSL 2 BASIC17.79■□□□□ 0.44
SCN7AQ01118 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.79■□□□□ 0.44
SCN7AQ01118 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SCN7AQ01118 PFN2-212ENST00000490975 858 ntTSL 4 BASIC17.79■□□□□ 0.44
SCN7AQ01118 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC17.79■□□□□ 0.44
SCN7AQ01118 CYP4F36P-201ENST00000589193 186 ntBASIC17.79■□□□□ 0.44
SCN7AQ01118 APOC1-209ENST00000592885 562 ntTSL 3 BASIC17.79■□□□□ 0.44
SCN7AQ01118 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCN7AQ01118 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SCN7AQ01118 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC17.79■□□□□ 0.44
SCN7AQ01118 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCN7AQ01118 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCN7AQ01118 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCN7AQ01118 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SCN7AQ01118 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.79■□□□□ 0.44
SCN7AQ01118 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC17.79■□□□□ 0.44
SCN7AQ01118 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCN7AQ01118 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SCN7AQ01118 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC17.78■□□□□ 0.44
SCN7AQ01118 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
SCN7AQ01118 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SCN7AQ01118 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SCN7AQ01118 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SCN7AQ01118 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCN7AQ01118 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.78■□□□□ 0.44
SCN7AQ01118 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.78■□□□□ 0.44
SCN7AQ01118 USP39-220ENST00000613444 2161 ntTSL 2 BASIC17.78■□□□□ 0.44
SCN7AQ01118 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCN7AQ01118 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC17.78■□□□□ 0.44
SCN7AQ01118 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SCN7AQ01118 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC17.78■□□□□ 0.44
SCN7AQ01118 ACTBP7-201ENST00000418351 1124 ntBASIC17.78■□□□□ 0.44
SCN7AQ01118 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC17.78■□□□□ 0.44
SCN7AQ01118 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC17.78■□□□□ 0.44
SCN7AQ01118 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC17.78■□□□□ 0.44
SCN7AQ01118 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC17.78■□□□□ 0.44
SCN7AQ01118 MIR4265-201ENST00000582152 99 ntBASIC17.78■□□□□ 0.44
SCN7AQ01118 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC17.78■□□□□ 0.44
SCN7AQ01118 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SCN7AQ01118 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCN7AQ01118 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCN7AQ01118 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SCN7AQ01118 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.78■□□□□ 0.44
SCN7AQ01118 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.78■□□□□ 0.44
SCN7AQ01118 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCN7AQ01118 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SCN7AQ01118 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCN7AQ01118 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SCN7AQ01118 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SCN7AQ01118 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCN7AQ01118 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC17.78■□□□□ 0.44
SCN7AQ01118 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SCN7AQ01118 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCN7AQ01118 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.78■□□□□ 0.44
SCN7AQ01118 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.78■□□□□ 0.44
SCN7AQ01118 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.78■□□□□ 0.44
SCN7AQ01118 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms