Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC092658.1-201ENST00000505836 891 ntBASIC15.28■□□□□ 0.04
NEK3P51956 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.28■□□□□ 0.04
NEK3P51956 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.28■□□□□ 0.04
NEK3P51956 DUX4L45-201ENST00000566406 1057 ntBASIC15.28■□□□□ 0.04
NEK3P51956 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NEK3P51956 MIR6799-201ENST00000620297 69 ntBASIC15.28■□□□□ 0.04
NEK3P51956 ENPP7P14-201ENST00000621765 1040 ntBASIC15.28■□□□□ 0.04
NEK3P51956 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC15.28■□□□□ 0.04
NEK3P51956 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.28■□□□□ 0.04
NEK3P51956 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.28■□□□□ 0.04
NEK3P51956 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NEK3P51956 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NEK3P51956 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NEK3P51956 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.28■□□□□ 0.04
NEK3P51956 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NEK3P51956 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.28■□□□□ 0.04
NEK3P51956 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NEK3P51956 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NEK3P51956 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.28■□□□□ 0.04
NEK3P51956 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.28■□□□□ 0.04
NEK3P51956 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
NEK3P51956 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NEK3P51956 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NEK3P51956 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.27■□□□□ 0.04
NEK3P51956 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NEK3P51956 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
NEK3P51956 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
NEK3P51956 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.27■□□□□ 0.04
NEK3P51956 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NEK3P51956 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
NEK3P51956 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NEK3P51956 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
NEK3P51956 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NEK3P51956 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NEK3P51956 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NEK3P51956 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.27■□□□□ 0.04
NEK3P51956 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.27■□□□□ 0.04
NEK3P51956 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NEK3P51956 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.04
NEK3P51956 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NEK3P51956 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.27■□□□□ 0.04
NEK3P51956 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NEK3P51956 HLA-K-203ENST00000430151 1046 ntBASIC15.27■□□□□ 0.04
NEK3P51956 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.27■□□□□ 0.04
NEK3P51956 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NEK3P51956 AC245100.3-201ENST00000441281 285 ntBASIC15.27■□□□□ 0.04
NEK3P51956 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.27■□□□□ 0.04
NEK3P51956 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
NEK3P51956 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
NEK3P51956 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.27■□□□□ 0.04
NEK3P51956 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.27■□□□□ 0.04
NEK3P51956 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.27■□□□□ 0.04
NEK3P51956 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
NEK3P51956 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
NEK3P51956 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
NEK3P51956 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
NEK3P51956 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NEK3P51956 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.27■□□□□ 0.03
NEK3P51956 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NEK3P51956 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.27■□□□□ 0.03
NEK3P51956 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.27■□□□□ 0.03
NEK3P51956 AL354989.2-201ENST00000435838 1540 ntBASIC15.27■□□□□ 0.03
NEK3P51956 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NEK3P51956 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NEK3P51956 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NEK3P51956 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.27■□□□□ 0.03
NEK3P51956 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
NEK3P51956 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NEK3P51956 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NEK3P51956 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.26■□□□□ 0.03
NEK3P51956 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NEK3P51956 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NEK3P51956 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NEK3P51956 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NEK3P51956 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NEK3P51956 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NEK3P51956 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NEK3P51956 LILRP1-201ENST00000444199 1370 ntBASIC15.26■□□□□ 0.03
NEK3P51956 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NEK3P51956 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NEK3P51956 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.26■□□□□ 0.03
NEK3P51956 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NEK3P51956 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.26■□□□□ 0.03
NEK3P51956 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.26■□□□□ 0.03
NEK3P51956 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NEK3P51956 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NEK3P51956 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NEK3P51956 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NEK3P51956 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NEK3P51956 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
NEK3P51956 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NEK3P51956 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NEK3P51956 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NEK3P51956 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NEK3P51956 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NEK3P51956 MIR1202-201ENST00000408529 83 ntBASIC15.26■□□□□ 0.03
NEK3P51956 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.26■□□□□ 0.03
NEK3P51956 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.26■□□□□ 0.03
NEK3P51956 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.26■□□□□ 0.03
NEK3P51956 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms