Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA4P43681 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA4P43681 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA4P43681 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.9□□□□□ -0.02
CHRNA4P43681 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA4P43681 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
CHRNA4P43681 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA4P43681 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA4P43681 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA4P43681 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CHRNA4P43681 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
CHRNA4P43681 AC152010.1-201ENST00000415779 2006 ntBASIC14.9□□□□□ -0.02
CHRNA4P43681 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA4P43681 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA4P43681 OR2I1P-209ENST00000641730 5365 ntBASIC14.9□□□□□ -0.02
CHRNA4P43681 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CHRNA4P43681 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA4P43681 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.9□□□□□ -0.02
CHRNA4P43681 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA4P43681 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA4P43681 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
CHRNA4P43681 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
CHRNA4P43681 AL590440.2-201ENST00000641973 1595 ntBASIC14.9□□□□□ -0.02
CHRNA4P43681 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA4P43681 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA4P43681 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNA4P43681 MIR600HG-201ENST00000449175 5984 ntBASIC14.89□□□□□ -0.03
CHRNA4P43681 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CHRNA4P43681 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA4P43681 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA4P43681 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.89□□□□□ -0.03
CHRNA4P43681 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNA4P43681 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA4P43681 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA4P43681 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA4P43681 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA4P43681 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.89□□□□□ -0.03
CHRNA4P43681 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA4P43681 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA4P43681 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA4P43681 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CHRNA4P43681 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA4P43681 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA4P43681 AC011498.7-201ENST00000624986 2027 ntBASIC14.89□□□□□ -0.03
CHRNA4P43681 KHSRPP1-201ENST00000427983 1768 ntBASIC14.89□□□□□ -0.03
CHRNA4P43681 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA4P43681 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA4P43681 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA4P43681 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA4P43681 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CHRNA4P43681 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA4P43681 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.89□□□□□ -0.03
CHRNA4P43681 AC119751.2-201ENST00000504529 210 ntBASIC14.89□□□□□ -0.03
CHRNA4P43681 AC104989.1-201ENST00000519711 778 ntBASIC14.89□□□□□ -0.03
CHRNA4P43681 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.89□□□□□ -0.03
CHRNA4P43681 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNA4P43681 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.89□□□□□ -0.03
CHRNA4P43681 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.89□□□□□ -0.03
CHRNA4P43681 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA4P43681 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CHRNA4P43681 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA4P43681 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA4P43681 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA4P43681 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA4P43681 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA4P43681 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA4P43681 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CHRNA4P43681 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA4P43681 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA4P43681 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNA4P43681 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
CHRNA4P43681 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CHRNA4P43681 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA4P43681 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.89□□□□□ -0.03
CHRNA4P43681 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA4P43681 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CHRNA4P43681 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CHRNA4P43681 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA4P43681 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CHRNA4P43681 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA4P43681 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA4P43681 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CHRNA4P43681 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA4P43681 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA4P43681 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.88□□□□□ -0.03
CHRNA4P43681 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA4P43681 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.88□□□□□ -0.03
CHRNA4P43681 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.88□□□□□ -0.03
CHRNA4P43681 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA4P43681 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.88□□□□□ -0.03
CHRNA4P43681 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA4P43681 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.88□□□□□ -0.03
CHRNA4P43681 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.88□□□□□ -0.03
CHRNA4P43681 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CHRNA4P43681 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA4P43681 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA4P43681 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA4P43681 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA4P43681 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA4P43681 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms