Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOBEC1P41238 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.36□□□□□ -0.27
APOBEC1P41238 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.36□□□□□ -0.27
APOBEC1P41238 YBX1P6-201ENST00000442962 1002 ntBASIC13.36□□□□□ -0.27
APOBEC1P41238 CSF2RBP1-201ENST00000447905 391 ntBASIC13.36□□□□□ -0.27
APOBEC1P41238 AC022210.1-201ENST00000449856 793 ntBASIC13.36□□□□□ -0.27
APOBEC1P41238 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOBEC1P41238 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.36□□□□□ -0.27
APOBEC1P41238 HILS1-202ENST00000545329 423 ntBASIC13.36□□□□□ -0.27
APOBEC1P41238 SNX29P1-201ENST00000548357 1007 ntBASIC13.36□□□□□ -0.27
APOBEC1P41238 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.36□□□□□ -0.27
APOBEC1P41238 AC239800.4-201ENST00000603712 296 ntBASIC13.36□□□□□ -0.27
APOBEC1P41238 MIR6805-201ENST00000615055 62 ntBASIC13.36□□□□□ -0.27
APOBEC1P41238 AL136301.1-201ENST00000615830 422 ntBASIC13.36□□□□□ -0.27
APOBEC1P41238 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOBEC1P41238 AC027601.3-201ENST00000622907 509 ntBASIC13.36□□□□□ -0.27
APOBEC1P41238 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
APOBEC1P41238 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
APOBEC1P41238 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
APOBEC1P41238 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOBEC1P41238 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOBEC1P41238 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOBEC1P41238 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOBEC1P41238 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
APOBEC1P41238 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOBEC1P41238 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.36□□□□□ -0.27
APOBEC1P41238 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
APOBEC1P41238 AC026748.1-201ENST00000624349 3251 ntBASIC13.36□□□□□ -0.27
APOBEC1P41238 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.36□□□□□ -0.27
APOBEC1P41238 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.36□□□□□ -0.27
APOBEC1P41238 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOBEC1P41238 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
APOBEC1P41238 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
APOBEC1P41238 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOBEC1P41238 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOBEC1P41238 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOBEC1P41238 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOBEC1P41238 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
APOBEC1P41238 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOBEC1P41238 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOBEC1P41238 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOBEC1P41238 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOBEC1P41238 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.35□□□□□ -0.27
APOBEC1P41238 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
APOBEC1P41238 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOBEC1P41238 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
APOBEC1P41238 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOBEC1P41238 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOBEC1P41238 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.35□□□□□ -0.27
APOBEC1P41238 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOBEC1P41238 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOBEC1P41238 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
APOBEC1P41238 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOBEC1P41238 ANKRD19P-201ENST00000338192 862 ntBASIC13.35□□□□□ -0.27
APOBEC1P41238 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
APOBEC1P41238 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
APOBEC1P41238 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.35□□□□□ -0.27
APOBEC1P41238 AC010141.1-201ENST00000411585 623 ntBASIC13.35□□□□□ -0.27
APOBEC1P41238 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.35□□□□□ -0.27
APOBEC1P41238 HLA-V-201ENST00000429037 534 ntBASIC13.35□□□□□ -0.27
APOBEC1P41238 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.35□□□□□ -0.27
APOBEC1P41238 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.35□□□□□ -0.27
APOBEC1P41238 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
APOBEC1P41238 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.35□□□□□ -0.27
APOBEC1P41238 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.35□□□□□ -0.27
APOBEC1P41238 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.35□□□□□ -0.27
APOBEC1P41238 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
APOBEC1P41238 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.35□□□□□ -0.27
APOBEC1P41238 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.35□□□□□ -0.27
APOBEC1P41238 DUX4L45-201ENST00000566406 1057 ntBASIC13.35□□□□□ -0.27
APOBEC1P41238 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.35□□□□□ -0.27
APOBEC1P41238 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
APOBEC1P41238 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.35□□□□□ -0.27
APOBEC1P41238 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.35□□□□□ -0.27
APOBEC1P41238 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.35□□□□□ -0.27
APOBEC1P41238 COX11-210ENST00000639671 696 ntBASIC13.35□□□□□ -0.27
APOBEC1P41238 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
APOBEC1P41238 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
APOBEC1P41238 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
APOBEC1P41238 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.35□□□□□ -0.27
APOBEC1P41238 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
APOBEC1P41238 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
APOBEC1P41238 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOBEC1P41238 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.35□□□□□ -0.27
APOBEC1P41238 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.35□□□□□ -0.27
APOBEC1P41238 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
APOBEC1P41238 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.35□□□□□ -0.27
APOBEC1P41238 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOBEC1P41238 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
APOBEC1P41238 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOBEC1P41238 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
APOBEC1P41238 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOBEC1P41238 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
APOBEC1P41238 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.35□□□□□ -0.27
APOBEC1P41238 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.35□□□□□ -0.27
APOBEC1P41238 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOBEC1P41238 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.35□□□□□ -0.27
APOBEC1P41238 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOBEC1P41238 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
APOBEC1P41238 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms