Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 RN7SL564P-201ENST00000496309 250 ntBASIC14.32□□□□□ -0.12
HOXA6P31267 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC14.32□□□□□ -0.12
HOXA6P31267 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC14.32□□□□□ -0.12
HOXA6P31267 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HOXA6P31267 FOXN3-AS2-201ENST00000554071 1262 ntBASIC14.32□□□□□ -0.12
HOXA6P31267 AC068831.5-201ENST00000557387 328 ntBASIC14.32□□□□□ -0.12
HOXA6P31267 USB1-205ENST00000561743 1135 ntTSL 3 BASIC14.32□□□□□ -0.12
HOXA6P31267 GAS7-216ENST00000583882 553 ntTSL 5 BASIC14.32□□□□□ -0.12
HOXA6P31267 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC14.32□□□□□ -0.12
HOXA6P31267 AC010632.2-201ENST00000588369 1224 ntBASIC14.32□□□□□ -0.12
HOXA6P31267 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC14.32□□□□□ -0.12
HOXA6P31267 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA6P31267 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.32□□□□□ -0.12
HOXA6P31267 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA6P31267 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA6P31267 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.32□□□□□ -0.12
HOXA6P31267 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA6P31267 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA6P31267 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HOXA6P31267 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA6P31267 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.32□□□□□ -0.12
HOXA6P31267 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA6P31267 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.32□□□□□ -0.12
HOXA6P31267 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HOXA6P31267 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA6P31267 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA6P31267 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA6P31267 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA6P31267 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA6P31267 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HOXA6P31267 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HOXA6P31267 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.31□□□□□ -0.12
HOXA6P31267 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.31□□□□□ -0.12
HOXA6P31267 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA6P31267 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA6P31267 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.31□□□□□ -0.12
HOXA6P31267 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
HOXA6P31267 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
HOXA6P31267 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA6P31267 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.31□□□□□ -0.12
HOXA6P31267 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HOXA6P31267 AC006504.5-208ENST00000588784 2401 ntBASIC14.31□□□□□ -0.12
HOXA6P31267 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA6P31267 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HOXA6P31267 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA6P31267 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA6P31267 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA6P31267 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA6P31267 MIR566-201ENST00000385187 94 ntBASIC14.31□□□□□ -0.12
HOXA6P31267 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HOXA6P31267 BX679664.3-201ENST00000414070 555 ntBASIC14.31□□□□□ -0.12
HOXA6P31267 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HOXA6P31267 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC14.31□□□□□ -0.12
HOXA6P31267 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC14.31□□□□□ -0.12
HOXA6P31267 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA6P31267 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC14.31□□□□□ -0.12
HOXA6P31267 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC14.31□□□□□ -0.12
HOXA6P31267 AC063952.3-201ENST00000467756 308 ntBASIC14.31□□□□□ -0.12
HOXA6P31267 AC113935.1-201ENST00000471722 555 ntBASIC14.31□□□□□ -0.12
HOXA6P31267 AC106047.2-201ENST00000511723 743 ntBASIC14.31□□□□□ -0.12
HOXA6P31267 AC090136.2-201ENST00000517809 420 ntBASIC14.31□□□□□ -0.12
HOXA6P31267 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA6P31267 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA6P31267 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HOXA6P31267 NAA40-205ENST00000539656 577 ntTSL 4 BASIC14.31□□□□□ -0.12
HOXA6P31267 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC14.31□□□□□ -0.12
HOXA6P31267 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.31□□□□□ -0.12
HOXA6P31267 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC14.31□□□□□ -0.12
HOXA6P31267 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC14.31□□□□□ -0.12
HOXA6P31267 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA6P31267 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.31□□□□□ -0.12
HOXA6P31267 AC010976.2-201ENST00000609697 852 ntBASIC14.31□□□□□ -0.12
HOXA6P31267 HMGB1P24-201ENST00000611897 328 ntBASIC14.31□□□□□ -0.12
HOXA6P31267 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC14.31□□□□□ -0.12
HOXA6P31267 TMBIM7P-203ENST00000641617 1718 ntBASIC14.31□□□□□ -0.12
HOXA6P31267 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.31□□□□□ -0.12
HOXA6P31267 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HOXA6P31267 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
HOXA6P31267 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA6P31267 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA6P31267 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HOXA6P31267 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HOXA6P31267 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.31□□□□□ -0.12
HOXA6P31267 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.31□□□□□ -0.12
HOXA6P31267 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.3□□□□□ -0.12
HOXA6P31267 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HOXA6P31267 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXA6P31267 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.3□□□□□ -0.12
HOXA6P31267 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.3□□□□□ -0.12
HOXA6P31267 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
HOXA6P31267 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.3□□□□□ -0.12
HOXA6P31267 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HOXA6P31267 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXA6P31267 AL591122.2-201ENST00000624125 1853 ntBASIC14.3□□□□□ -0.12
HOXA6P31267 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HOXA6P31267 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC14.3□□□□□ -0.12
HOXA6P31267 ACTBP7-201ENST00000418351 1124 ntBASIC14.3□□□□□ -0.12
HOXA6P31267 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HOXA6P31267 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC14.3□□□□□ -0.12
HOXA6P31267 AL451000.1-201ENST00000451300 1186 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms