Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.93□□□□□ -0.02
XPAP23025 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
XPAP23025 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
XPAP23025 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
XPAP23025 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.93□□□□□ -0.02
XPAP23025 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.93□□□□□ -0.02
XPAP23025 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
XPAP23025 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
XPAP23025 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.93□□□□□ -0.02
XPAP23025 LINC01101-201ENST00000622953 1884 ntBASIC14.93□□□□□ -0.02
XPAP23025 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
XPAP23025 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC14.93□□□□□ -0.02
XPAP23025 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
XPAP23025 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
XPAP23025 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
XPAP23025 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
XPAP23025 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
XPAP23025 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
XPAP23025 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
XPAP23025 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.93□□□□□ -0.02
XPAP23025 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.93□□□□□ -0.02
XPAP23025 HSPB1P2-201ENST00000448722 546 ntBASIC14.93□□□□□ -0.02
XPAP23025 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.93□□□□□ -0.02
XPAP23025 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.93□□□□□ -0.02
XPAP23025 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.93□□□□□ -0.02
XPAP23025 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.93□□□□□ -0.02
XPAP23025 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
XPAP23025 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.93□□□□□ -0.02
XPAP23025 AC100827.2-201ENST00000563214 1194 ntBASIC14.93□□□□□ -0.02
XPAP23025 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
XPAP23025 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
XPAP23025 AC005695.3-201ENST00000614522 232 ntBASIC14.93□□□□□ -0.02
XPAP23025 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
XPAP23025 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
XPAP23025 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.93□□□□□ -0.02
XPAP23025 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
XPAP23025 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.93□□□□□ -0.02
XPAP23025 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
XPAP23025 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
XPAP23025 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.93□□□□□ -0.02
XPAP23025 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
XPAP23025 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
XPAP23025 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
XPAP23025 CICP23-201ENST00000605013 2741 ntBASIC14.93□□□□□ -0.02
XPAP23025 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
XPAP23025 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.93□□□□□ -0.02
XPAP23025 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
XPAP23025 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.92□□□□□ -0.02
XPAP23025 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
XPAP23025 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
XPAP23025 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
XPAP23025 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
XPAP23025 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
XPAP23025 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
XPAP23025 SHC1P1-201ENST00000425230 1745 ntBASIC14.92□□□□□ -0.02
XPAP23025 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
XPAP23025 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
XPAP23025 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
XPAP23025 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
XPAP23025 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
XPAP23025 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
XPAP23025 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
XPAP23025 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
XPAP23025 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC14.92□□□□□ -0.02
XPAP23025 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
XPAP23025 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
XPAP23025 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
XPAP23025 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
XPAP23025 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.92□□□□□ -0.02
XPAP23025 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.92□□□□□ -0.02
XPAP23025 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.92□□□□□ -0.02
XPAP23025 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.92□□□□□ -0.02
XPAP23025 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.92□□□□□ -0.02
XPAP23025 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.92□□□□□ -0.02
XPAP23025 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.92□□□□□ -0.02
XPAP23025 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
XPAP23025 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.92□□□□□ -0.02
XPAP23025 AC007663.3-201ENST00000609632 465 ntBASIC14.92□□□□□ -0.02
XPAP23025 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.92□□□□□ -0.02
XPAP23025 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
XPAP23025 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
XPAP23025 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
XPAP23025 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.92□□□□□ -0.02
XPAP23025 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
XPAP23025 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
XPAP23025 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.92□□□□□ -0.02
XPAP23025 AJ011931.1-201ENST00000618749 2492 ntBASIC14.92□□□□□ -0.02
XPAP23025 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
XPAP23025 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
XPAP23025 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
XPAP23025 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
XPAP23025 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
XPAP23025 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
XPAP23025 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
XPAP23025 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.92□□□□□ -0.02
XPAP23025 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
XPAP23025 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
XPAP23025 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
XPAP23025 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.92□□□□□ -0.02
XPAP23025 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms