Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP4AP20648 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ATP4AP20648 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.33■□□□□ 0.2
ATP4AP20648 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ATP4AP20648 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.33■□□□□ 0.2
ATP4AP20648 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
ATP4AP20648 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.32■□□□□ 0.2
ATP4AP20648 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ATP4AP20648 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATP4AP20648 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP4AP20648 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
ATP4AP20648 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP4AP20648 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP4AP20648 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP4AP20648 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP4AP20648 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.32■□□□□ 0.2
ATP4AP20648 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.32■□□□□ 0.2
ATP4AP20648 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
ATP4AP20648 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP4AP20648 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATP4AP20648 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATP4AP20648 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.32■□□□□ 0.2
ATP4AP20648 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP4AP20648 AC078875.1-201ENST00000431907 724 ntBASIC16.32■□□□□ 0.2
ATP4AP20648 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP4AP20648 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP4AP20648 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP4AP20648 AC012618.1-201ENST00000461223 412 ntBASIC16.32■□□□□ 0.2
ATP4AP20648 IMP3P2-201ENST00000489760 475 ntBASIC16.32■□□□□ 0.2
ATP4AP20648 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ATP4AP20648 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.32■□□□□ 0.2
ATP4AP20648 RBM8B-201ENST00000555532 525 ntBASIC16.32■□□□□ 0.2
ATP4AP20648 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.32■□□□□ 0.2
ATP4AP20648 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.32■□□□□ 0.2
ATP4AP20648 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.32■□□□□ 0.2
ATP4AP20648 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
ATP4AP20648 AC015688.4-201ENST00000580780 1647 ntBASIC16.32■□□□□ 0.2
ATP4AP20648 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ATP4AP20648 AC068587.10-201ENST00000641210 219 ntBASIC16.32■□□□□ 0.2
ATP4AP20648 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP4AP20648 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
ATP4AP20648 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
ATP4AP20648 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
ATP4AP20648 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP4AP20648 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP4AP20648 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP4AP20648 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ATP4AP20648 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP4AP20648 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP4AP20648 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
ATP4AP20648 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP4AP20648 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ATP4AP20648 AC026748.1-201ENST00000624349 3251 ntBASIC16.31■□□□□ 0.2
ATP4AP20648 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP4AP20648 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
ATP4AP20648 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP4AP20648 AC023908.3-201ENST00000564211 3047 ntBASIC16.31■□□□□ 0.2
ATP4AP20648 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP4AP20648 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP4AP20648 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.31■□□□□ 0.2
ATP4AP20648 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.31■□□□□ 0.2
ATP4AP20648 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ATP4AP20648 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP4AP20648 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP4AP20648 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP4AP20648 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP4AP20648 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP4AP20648 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP4AP20648 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP4AP20648 KRT18P36-201ENST00000411618 1276 ntBASIC16.31■□□□□ 0.2
ATP4AP20648 AL596276.2-201ENST00000447525 331 ntBASIC16.31■□□□□ 0.2
ATP4AP20648 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP4AP20648 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP4AP20648 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.31■□□□□ 0.2
ATP4AP20648 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.31■□□□□ 0.2
ATP4AP20648 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
ATP4AP20648 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP4AP20648 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP4AP20648 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP4AP20648 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP4AP20648 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP4AP20648 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP4AP20648 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ATP4AP20648 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP4AP20648 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP4AP20648 AC009093.10-201ENST00000641956 1442 ntBASIC16.3■□□□□ 0.2
ATP4AP20648 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP4AP20648 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.3■□□□□ 0.2
ATP4AP20648 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.3■□□□□ 0.2
ATP4AP20648 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP4AP20648 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP4AP20648 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP4AP20648 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ATP4AP20648 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.3■□□□□ 0.2
ATP4AP20648 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP4AP20648 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP4AP20648 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP4AP20648 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.3■□□□□ 0.2
ATP4AP20648 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
ATP4AP20648 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms