Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB3BP20337 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
RAB3BP20337 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
RAB3BP20337 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
RAB3BP20337 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13□□□□□ -0.33
RAB3BP20337 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
RAB3BP20337 AC114271.1-201ENST00000612689 2813 ntBASIC13□□□□□ -0.33
RAB3BP20337 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
RAB3BP20337 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13□□□□□ -0.33
RAB3BP20337 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13□□□□□ -0.33
RAB3BP20337 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
RAB3BP20337 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13□□□□□ -0.33
RAB3BP20337 HSPA8P5-201ENST00000456928 2069 ntBASIC13□□□□□ -0.33
RAB3BP20337 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB3BP20337 AC068760.1-201ENST00000493579 1953 ntBASIC13□□□□□ -0.33
RAB3BP20337 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
RAB3BP20337 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RAB3BP20337 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
RAB3BP20337 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13□□□□□ -0.33
RAB3BP20337 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB3BP20337 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB3BP20337 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13□□□□□ -0.33
RAB3BP20337 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13□□□□□ -0.33
RAB3BP20337 AC093525.8-201ENST00000624099 1342 ntBASIC13□□□□□ -0.33
RAB3BP20337 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB3BP20337 AL645937.2-201ENST00000396808 931 ntBASIC13□□□□□ -0.33
RAB3BP20337 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
RAB3BP20337 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13□□□□□ -0.33
RAB3BP20337 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13□□□□□ -0.33
RAB3BP20337 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13□□□□□ -0.33
RAB3BP20337 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
RAB3BP20337 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13□□□□□ -0.33
RAB3BP20337 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13□□□□□ -0.33
RAB3BP20337 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13□□□□□ -0.33
RAB3BP20337 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13□□□□□ -0.33
RAB3BP20337 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
RAB3BP20337 MIR4453-201ENST00000584019 89 ntBASIC13□□□□□ -0.33
RAB3BP20337 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13□□□□□ -0.33
RAB3BP20337 AC004461.2-201ENST00000629517 803 ntBASIC13□□□□□ -0.33
RAB3BP20337 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13□□□□□ -0.33
RAB3BP20337 AC105339.1-204ENST00000636249 355 ntBASIC13□□□□□ -0.33
RAB3BP20337 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
RAB3BP20337 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB3BP20337 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13□□□□□ -0.33
RAB3BP20337 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RAB3BP20337 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB3BP20337 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB3BP20337 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB3BP20337 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
RAB3BP20337 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB3BP20337 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RAB3BP20337 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB3BP20337 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
RAB3BP20337 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13□□□□□ -0.33
RAB3BP20337 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
RAB3BP20337 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
RAB3BP20337 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RAB3BP20337 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13□□□□□ -0.33
RAB3BP20337 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
RAB3BP20337 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RAB3BP20337 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RAB3BP20337 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
RAB3BP20337 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13□□□□□ -0.33
RAB3BP20337 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
RAB3BP20337 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB3BP20337 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB3BP20337 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB3BP20337 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB3BP20337 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB3BP20337 AC004899.2-201ENST00000622993 3860 ntBASIC12.99□□□□□ -0.33
RAB3BP20337 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.99□□□□□ -0.33
RAB3BP20337 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB3BP20337 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB3BP20337 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB3BP20337 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB3BP20337 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
RAB3BP20337 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
RAB3BP20337 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
RAB3BP20337 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB3BP20337 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB3BP20337 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
RAB3BP20337 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB3BP20337 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB3BP20337 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB3BP20337 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.99□□□□□ -0.33
RAB3BP20337 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB3BP20337 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB3BP20337 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB3BP20337 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RAB3BP20337 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.99□□□□□ -0.33
RAB3BP20337 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
RAB3BP20337 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB3BP20337 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB3BP20337 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.99□□□□□ -0.33
RAB3BP20337 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.99□□□□□ -0.33
RAB3BP20337 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.99□□□□□ -0.33
RAB3BP20337 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC12.99□□□□□ -0.33
RAB3BP20337 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RAB3BP20337 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.99□□□□□ -0.33
RAB3BP20337 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms