Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC092896.1-201ENST00000465850 380 ntBASIC18.84■□□□□ 0.61
COL5A2P05997 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC18.84■□□□□ 0.61
COL5A2P05997 CES1P2-201ENST00000566467 1242 ntBASIC18.84■□□□□ 0.61
COL5A2P05997 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC18.84■□□□□ 0.61
COL5A2P05997 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
COL5A2P05997 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.84■□□□□ 0.61
COL5A2P05997 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.84■□□□□ 0.61
COL5A2P05997 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL5A2P05997 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL5A2P05997 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL5A2P05997 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL5A2P05997 AC018442.1-201ENST00000421439 2061 ntBASIC18.84■□□□□ 0.61
COL5A2P05997 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL5A2P05997 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL5A2P05997 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
COL5A2P05997 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL5A2P05997 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC18.84■□□□□ 0.61
COL5A2P05997 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL5A2P05997 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL5A2P05997 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
COL5A2P05997 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL5A2P05997 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL5A2P05997 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC18.84■□□□□ 0.61
COL5A2P05997 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL5A2P05997 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC18.84■□□□□ 0.61
COL5A2P05997 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC18.84■□□□□ 0.61
COL5A2P05997 ASS1P2-201ENST00000439895 1223 ntBASIC18.84■□□□□ 0.61
COL5A2P05997 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC18.84■□□□□ 0.61
COL5A2P05997 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
COL5A2P05997 SEPHS2P1-201ENST00000511618 1162 ntBASIC18.84■□□□□ 0.61
COL5A2P05997 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC18.84■□□□□ 0.61
COL5A2P05997 BATF-202ENST00000555504 361 ntTSL 2 BASIC18.84■□□□□ 0.61
COL5A2P05997 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL5A2P05997 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC18.84■□□□□ 0.61
COL5A2P05997 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC18.84■□□□□ 0.61
COL5A2P05997 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
COL5A2P05997 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL5A2P05997 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
COL5A2P05997 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL5A2P05997 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC18.83■□□□□ 0.61
COL5A2P05997 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL5A2P05997 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL5A2P05997 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
COL5A2P05997 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL5A2P05997 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
COL5A2P05997 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
COL5A2P05997 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC18.83■□□□□ 0.6
COL5A2P05997 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COL5A2P05997 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COL5A2P05997 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COL5A2P05997 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
COL5A2P05997 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL5A2P05997 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL5A2P05997 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL5A2P05997 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL5A2P05997 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL5A2P05997 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL5A2P05997 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COL5A2P05997 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
COL5A2P05997 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC18.83■□□□□ 0.6
COL5A2P05997 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC18.83■□□□□ 0.6
COL5A2P05997 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
COL5A2P05997 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC18.83■□□□□ 0.6
COL5A2P05997 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC18.83■□□□□ 0.6
COL5A2P05997 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC18.83■□□□□ 0.6
COL5A2P05997 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC18.83■□□□□ 0.6
COL5A2P05997 PPT1-215ENST00000641471 2368 ntBASIC18.83■□□□□ 0.6
COL5A2P05997 MPI-203ENST00000535694 1523 ntTSL 2 BASIC18.83■□□□□ 0.6
COL5A2P05997 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
COL5A2P05997 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COL5A2P05997 AMT-256ENST00000638063 1783 ntTSL 5 BASIC18.83■□□□□ 0.6
COL5A2P05997 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
COL5A2P05997 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COL5A2P05997 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL5A2P05997 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL5A2P05997 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.82■□□□□ 0.6
COL5A2P05997 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC18.82■□□□□ 0.6
COL5A2P05997 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
COL5A2P05997 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.82■□□□□ 0.6
COL5A2P05997 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL5A2P05997 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC18.82■□□□□ 0.6
COL5A2P05997 MYADML-201ENST00000474610 2147 ntBASIC18.82■□□□□ 0.6
COL5A2P05997 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL5A2P05997 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC18.82■□□□□ 0.6
COL5A2P05997 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL5A2P05997 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL5A2P05997 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC18.82■□□□□ 0.6
COL5A2P05997 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL5A2P05997 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL5A2P05997 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL5A2P05997 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL5A2P05997 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.82■□□□□ 0.6
COL5A2P05997 AC091951.1-201ENST00000512854 2465 ntBASIC18.82■□□□□ 0.6
COL5A2P05997 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
COL5A2P05997 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC18.82■□□□□ 0.6
COL5A2P05997 LINP1-201ENST00000417112 917 ntTSL 2 BASIC18.82■□□□□ 0.6
COL5A2P05997 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC18.82■□□□□ 0.6
COL5A2P05997 BRI3P1-201ENST00000440440 378 ntBASIC18.82■□□□□ 0.6
COL5A2P05997 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
COL5A2P05997 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms