Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCRP04035 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCRP04035 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
HMGCRP04035 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.5■□□□□ 0.23
HMGCRP04035 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCRP04035 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.49■□□□□ 0.23
HMGCRP04035 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCRP04035 AC104640.1-201ENST00000562617 2109 ntBASIC16.49■□□□□ 0.23
HMGCRP04035 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCRP04035 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCRP04035 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCRP04035 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCRP04035 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCRP04035 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCRP04035 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCRP04035 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCRP04035 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCRP04035 KRT17P5-201ENST00000332088 839 ntBASIC16.49■□□□□ 0.23
HMGCRP04035 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCRP04035 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
HMGCRP04035 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
HMGCRP04035 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
HMGCRP04035 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.49■□□□□ 0.23
HMGCRP04035 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCRP04035 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.49■□□□□ 0.23
HMGCRP04035 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.49■□□□□ 0.23
HMGCRP04035 RN7SL396P-201ENST00000471086 295 ntBASIC16.49■□□□□ 0.23
HMGCRP04035 NEU3-207ENST00000534628 746 ntTSL 2 BASIC16.49■□□□□ 0.23
HMGCRP04035 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCRP04035 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCRP04035 HERC2P11-201ENST00000562845 725 ntBASIC16.49■□□□□ 0.23
HMGCRP04035 AC100756.2-201ENST00000569537 736 ntBASIC16.49■□□□□ 0.23
HMGCRP04035 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC16.49■□□□□ 0.23
HMGCRP04035 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.49■□□□□ 0.23
HMGCRP04035 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
HMGCRP04035 AC013726.1-201ENST00000563747 2285 ntBASIC16.49■□□□□ 0.23
HMGCRP04035 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCRP04035 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC16.49■□□□□ 0.23
HMGCRP04035 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HMGCRP04035 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCRP04035 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCRP04035 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCRP04035 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCRP04035 REXO1L2P-201ENST00000425429 2069 ntBASIC16.49■□□□□ 0.23
HMGCRP04035 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCRP04035 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
HMGCRP04035 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.48■□□□□ 0.23
HMGCRP04035 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGCRP04035 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HMGCRP04035 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
HMGCRP04035 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGCRP04035 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
HMGCRP04035 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.48■□□□□ 0.23
HMGCRP04035 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HMGCRP04035 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.48■□□□□ 0.23
HMGCRP04035 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.48■□□□□ 0.23
HMGCRP04035 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGCRP04035 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC16.48■□□□□ 0.23
HMGCRP04035 STK16-203ENST00000409516 895 ntTSL 2 BASIC16.48■□□□□ 0.23
HMGCRP04035 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HMGCRP04035 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HMGCRP04035 AC012158.2-201ENST00000536546 354 ntBASIC16.48■□□□□ 0.23
HMGCRP04035 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC16.48■□□□□ 0.23
HMGCRP04035 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC16.48■□□□□ 0.23
HMGCRP04035 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC16.48■□□□□ 0.23
HMGCRP04035 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC16.48■□□□□ 0.23
HMGCRP04035 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
HMGCRP04035 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HMGCRP04035 AL451007.2-201ENST00000632004 563 ntBASIC16.48■□□□□ 0.23
HMGCRP04035 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGCRP04035 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGCRP04035 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.48■□□□□ 0.23
HMGCRP04035 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HMGCRP04035 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGCRP04035 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGCRP04035 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
HMGCRP04035 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGCRP04035 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.48■□□□□ 0.23
HMGCRP04035 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGCRP04035 AL109954.1-202ENST00000564051 2148 ntBASIC16.48■□□□□ 0.23
HMGCRP04035 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC16.48■□□□□ 0.23
HMGCRP04035 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGCRP04035 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGCRP04035 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
HMGCRP04035 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.47■□□□□ 0.23
HMGCRP04035 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGCRP04035 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
HMGCRP04035 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGCRP04035 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HMGCRP04035 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.47■□□□□ 0.23
HMGCRP04035 AC144831.1-201ENST00000573312 2656 ntBASIC16.47■□□□□ 0.23
HMGCRP04035 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
HMGCRP04035 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGCRP04035 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGCRP04035 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HMGCRP04035 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HMGCRP04035 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.47■□□□□ 0.23
HMGCRP04035 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
HMGCRP04035 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HMGCRP04035 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms