Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
APOC1P02654 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC1P02654 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC1P02654 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOC1P02654 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.17□□□□□ -0.3
APOC1P02654 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
APOC1P02654 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.17□□□□□ -0.3
APOC1P02654 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.17□□□□□ -0.3
APOC1P02654 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.17□□□□□ -0.3
APOC1P02654 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOC1P02654 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOC1P02654 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
APOC1P02654 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOC1P02654 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC1P02654 AC006504.5-208ENST00000588784 2401 ntBASIC13.17□□□□□ -0.3
APOC1P02654 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC1P02654 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOC1P02654 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC1P02654 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.17□□□□□ -0.3
APOC1P02654 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOC1P02654 TLE1P1-201ENST00000422965 589 ntBASIC13.17□□□□□ -0.3
APOC1P02654 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.17□□□□□ -0.3
APOC1P02654 AC092183.1-201ENST00000469884 875 ntBASIC13.17□□□□□ -0.3
APOC1P02654 GIMAP3P-201ENST00000495150 836 ntBASIC13.17□□□□□ -0.3
APOC1P02654 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.17□□□□□ -0.3
APOC1P02654 KRT18P25-201ENST00000508931 1278 ntBASIC13.17□□□□□ -0.3
APOC1P02654 AP001582.1-201ENST00000525856 295 ntBASIC13.17□□□□□ -0.3
APOC1P02654 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.17□□□□□ -0.3
APOC1P02654 AC092552.1-201ENST00000547243 906 ntBASIC13.17□□□□□ -0.3
APOC1P02654 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC1P02654 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.17□□□□□ -0.3
APOC1P02654 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOC1P02654 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.17□□□□□ -0.3
APOC1P02654 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.17□□□□□ -0.3
APOC1P02654 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
APOC1P02654 AP005019.2-201ENST00000615104 511 ntBASIC13.17□□□□□ -0.3
APOC1P02654 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
APOC1P02654 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.17□□□□□ -0.3
APOC1P02654 AJ011932.1-201ENST00000621707 465 ntBASIC13.17□□□□□ -0.3
APOC1P02654 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.17□□□□□ -0.3
APOC1P02654 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
APOC1P02654 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
APOC1P02654 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.17□□□□□ -0.3
APOC1P02654 AC131212.3-201ENST00000624087 4219 ntBASIC13.17□□□□□ -0.3
APOC1P02654 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
APOC1P02654 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
APOC1P02654 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.17□□□□□ -0.3
APOC1P02654 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC1P02654 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC1P02654 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC1P02654 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOC1P02654 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOC1P02654 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.17□□□□□ -0.3
APOC1P02654 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOC1P02654 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOC1P02654 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
APOC1P02654 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC1P02654 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOC1P02654 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
APOC1P02654 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC1P02654 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.17□□□□□ -0.3
APOC1P02654 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
APOC1P02654 USP47-202ENST00000339865 7775 ntTSL 2 BASIC13.16□□□□□ -0.3
APOC1P02654 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APOC1P02654 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC1P02654 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.16□□□□□ -0.3
APOC1P02654 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APOC1P02654 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC1P02654 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC1P02654 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC1P02654 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.16□□□□□ -0.3
APOC1P02654 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC1P02654 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.16□□□□□ -0.3
APOC1P02654 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
APOC1P02654 MTHFR-210ENST00000641407 2387 ntBASIC13.16□□□□□ -0.3
APOC1P02654 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APOC1P02654 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APOC1P02654 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC1P02654 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC1P02654 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.16□□□□□ -0.3
APOC1P02654 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC1P02654 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
APOC1P02654 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC1P02654 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.16□□□□□ -0.3
APOC1P02654 ACKR1-201ENST00000368121 1240 ntBASIC13.16□□□□□ -0.3
APOC1P02654 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.16□□□□□ -0.3
APOC1P02654 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.16□□□□□ -0.3
APOC1P02654 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.16□□□□□ -0.3
APOC1P02654 CYMP-203ENST00000474680 1263 ntBASIC13.16□□□□□ -0.3
APOC1P02654 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.16□□□□□ -0.3
APOC1P02654 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.16□□□□□ -0.3
APOC1P02654 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
APOC1P02654 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.16□□□□□ -0.3
APOC1P02654 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.16□□□□□ -0.3
APOC1P02654 AC123567.1-201ENST00000548294 1261 ntBASIC13.16□□□□□ -0.3
APOC1P02654 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
APOC1P02654 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.16□□□□□ -0.3
APOC1P02654 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
APOC1P02654 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.16□□□□□ -0.3
APOC1P02654 AC004233.3-201ENST00000607794 1269 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms