Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFPL1O75677 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFPL1O75677 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
RFPL1O75677 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFPL1O75677 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RFPL1O75677 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.85□□□□□ -0.03
RFPL1O75677 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.85□□□□□ -0.03
RFPL1O75677 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RFPL1O75677 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RFPL1O75677 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFPL1O75677 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RFPL1O75677 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RFPL1O75677 AC104989.1-201ENST00000519711 778 ntBASIC14.85□□□□□ -0.03
RFPL1O75677 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.85□□□□□ -0.03
RFPL1O75677 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.85□□□□□ -0.03
RFPL1O75677 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.85□□□□□ -0.03
RFPL1O75677 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.85□□□□□ -0.03
RFPL1O75677 MIR4259-201ENST00000584466 101 ntBASIC14.85□□□□□ -0.03
RFPL1O75677 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFPL1O75677 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.85□□□□□ -0.03
RFPL1O75677 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.85□□□□□ -0.03
RFPL1O75677 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RFPL1O75677 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.85□□□□□ -0.03
RFPL1O75677 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
RFPL1O75677 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFPL1O75677 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFPL1O75677 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RFPL1O75677 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.85□□□□□ -0.03
RFPL1O75677 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.85□□□□□ -0.03
RFPL1O75677 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.85□□□□□ -0.03
RFPL1O75677 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RFPL1O75677 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RFPL1O75677 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.85□□□□□ -0.03
RFPL1O75677 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFPL1O75677 AC011498.7-201ENST00000624986 2027 ntBASIC14.85□□□□□ -0.03
RFPL1O75677 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.85□□□□□ -0.03
RFPL1O75677 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.85□□□□□ -0.03
RFPL1O75677 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.85□□□□□ -0.03
RFPL1O75677 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RFPL1O75677 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RFPL1O75677 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RFPL1O75677 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFPL1O75677 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFPL1O75677 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFPL1O75677 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFPL1O75677 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFPL1O75677 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
RFPL1O75677 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RFPL1O75677 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.84□□□□□ -0.03
RFPL1O75677 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.84□□□□□ -0.03
RFPL1O75677 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.84□□□□□ -0.03
RFPL1O75677 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RFPL1O75677 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFPL1O75677 RNU1-114P-201ENST00000365297 166 ntBASIC14.84□□□□□ -0.03
RFPL1O75677 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RFPL1O75677 AC007969.1-201ENST00000433675 447 ntBASIC14.84□□□□□ -0.03
RFPL1O75677 EIF3FP3-201ENST00000434851 1086 ntBASIC14.84□□□□□ -0.03
RFPL1O75677 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.84□□□□□ -0.03
RFPL1O75677 AC119751.2-201ENST00000504529 210 ntBASIC14.84□□□□□ -0.03
RFPL1O75677 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.84□□□□□ -0.03
RFPL1O75677 AC092552.1-201ENST00000547243 906 ntBASIC14.84□□□□□ -0.03
RFPL1O75677 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFPL1O75677 AC010319.3-201ENST00000597028 470 ntBASIC14.84□□□□□ -0.03
RFPL1O75677 MIR6775-201ENST00000617557 69 ntBASIC14.84□□□□□ -0.03
RFPL1O75677 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.84□□□□□ -0.03
RFPL1O75677 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RFPL1O75677 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
RFPL1O75677 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFPL1O75677 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFPL1O75677 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.84□□□□□ -0.03
RFPL1O75677 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFPL1O75677 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
RFPL1O75677 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFPL1O75677 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFPL1O75677 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFPL1O75677 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RFPL1O75677 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RFPL1O75677 AC023794.5-201ENST00000564380 2157 ntBASIC14.84□□□□□ -0.03
RFPL1O75677 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.84□□□□□ -0.03
RFPL1O75677 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RFPL1O75677 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFPL1O75677 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RFPL1O75677 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RFPL1O75677 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.83□□□□□ -0.03
RFPL1O75677 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
RFPL1O75677 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.83□□□□□ -0.03
RFPL1O75677 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
RFPL1O75677 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
RFPL1O75677 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
RFPL1O75677 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RFPL1O75677 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
RFPL1O75677 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RFPL1O75677 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
RFPL1O75677 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RFPL1O75677 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RFPL1O75677 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RFPL1O75677 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RFPL1O75677 AC015818.8-201ENST00000587907 1519 ntBASIC14.83□□□□□ -0.04
RFPL1O75677 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.83□□□□□ -0.04
RFPL1O75677 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms