Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.34■□□□□ 0.05
LRCH4O75427 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.34■□□□□ 0.05
LRCH4O75427 CHMP1AP1-201ENST00000445563 662 ntBASIC15.34■□□□□ 0.05
LRCH4O75427 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH4O75427 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH4O75427 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.34■□□□□ 0.05
LRCH4O75427 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.34■□□□□ 0.05
LRCH4O75427 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LRCH4O75427 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH4O75427 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH4O75427 ZACNP1-201ENST00000612259 710 ntBASIC15.34■□□□□ 0.05
LRCH4O75427 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.34■□□□□ 0.05
LRCH4O75427 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
LRCH4O75427 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH4O75427 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LRCH4O75427 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH4O75427 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH4O75427 AHCYP2-201ENST00000430630 1300 ntBASIC15.34■□□□□ 0.05
LRCH4O75427 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.34■□□□□ 0.05
LRCH4O75427 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH4O75427 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH4O75427 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH4O75427 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH4O75427 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH4O75427 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.34■□□□□ 0.05
LRCH4O75427 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH4O75427 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.34■□□□□ 0.05
LRCH4O75427 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH4O75427 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH4O75427 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.34■□□□□ 0.05
LRCH4O75427 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
LRCH4O75427 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
LRCH4O75427 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LRCH4O75427 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LRCH4O75427 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LRCH4O75427 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
LRCH4O75427 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
LRCH4O75427 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LRCH4O75427 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
LRCH4O75427 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH4O75427 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH4O75427 HSPA8P5-201ENST00000456928 2069 ntBASIC15.33■□□□□ 0.04
LRCH4O75427 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH4O75427 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH4O75427 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH4O75427 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH4O75427 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH4O75427 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.33■□□□□ 0.04
LRCH4O75427 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.33■□□□□ 0.04
LRCH4O75427 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.33■□□□□ 0.04
LRCH4O75427 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.33■□□□□ 0.04
LRCH4O75427 CNN2P10-201ENST00000443067 918 ntBASIC15.33■□□□□ 0.04
LRCH4O75427 CICP12-201ENST00000455801 843 ntBASIC15.33■□□□□ 0.04
LRCH4O75427 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.33■□□□□ 0.04
LRCH4O75427 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
LRCH4O75427 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.33■□□□□ 0.04
LRCH4O75427 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.33■□□□□ 0.04
LRCH4O75427 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.33■□□□□ 0.04
LRCH4O75427 PPY2P-201ENST00000582808 702 ntBASIC15.33■□□□□ 0.04
LRCH4O75427 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH4O75427 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH4O75427 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LRCH4O75427 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH4O75427 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.33■□□□□ 0.04
LRCH4O75427 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH4O75427 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH4O75427 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
LRCH4O75427 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH4O75427 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.33■□□□□ 0.04
LRCH4O75427 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH4O75427 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LRCH4O75427 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.33■□□□□ 0.04
LRCH4O75427 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH4O75427 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH4O75427 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH4O75427 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH4O75427 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
LRCH4O75427 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.33■□□□□ 0.04
LRCH4O75427 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LRCH4O75427 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH4O75427 AC005840.4-201ENST00000541242 2494 ntBASIC15.33■□□□□ 0.04
LRCH4O75427 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH4O75427 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRCH4O75427 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH4O75427 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.32■□□□□ 0.04
LRCH4O75427 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LRCH4O75427 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.32■□□□□ 0.04
LRCH4O75427 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH4O75427 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.32■□□□□ 0.04
LRCH4O75427 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LRCH4O75427 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.32■□□□□ 0.04
LRCH4O75427 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH4O75427 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
LRCH4O75427 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.32■□□□□ 0.04
LRCH4O75427 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LRCH4O75427 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH4O75427 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.32■□□□□ 0.04
LRCH4O75427 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH4O75427 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRCH4O75427 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms