Protein–RNA interactions for Protein: O60759

CYTIP, Cytohesin-interacting protein, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTIPO60759 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CYTIPO60759 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.23□□□□□ -0.29
CYTIPO60759 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.23□□□□□ -0.29
CYTIPO60759 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CYTIPO60759 AL136301.1-201ENST00000615830 422 ntBASIC13.23□□□□□ -0.29
CYTIPO60759 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CYTIPO60759 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.23□□□□□ -0.29
CYTIPO60759 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CYTIPO60759 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.23□□□□□ -0.29
CYTIPO60759 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CYTIPO60759 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CYTIPO60759 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CYTIPO60759 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
CYTIPO60759 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CYTIPO60759 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.23□□□□□ -0.29
CYTIPO60759 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CYTIPO60759 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CYTIPO60759 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CYTIPO60759 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CYTIPO60759 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CYTIPO60759 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.22□□□□□ -0.29
CYTIPO60759 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CYTIPO60759 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CYTIPO60759 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CYTIPO60759 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CYTIPO60759 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.22□□□□□ -0.29
CYTIPO60759 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CYTIPO60759 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CYTIPO60759 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CYTIPO60759 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.22□□□□□ -0.29
CYTIPO60759 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.22□□□□□ -0.29
CYTIPO60759 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CYTIPO60759 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
CYTIPO60759 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.22□□□□□ -0.29
CYTIPO60759 AC010141.1-201ENST00000411585 623 ntBASIC13.22□□□□□ -0.29
CYTIPO60759 MTX1P1-201ENST00000440904 838 ntBASIC13.22□□□□□ -0.29
CYTIPO60759 PUDPP3-201ENST00000445368 636 ntBASIC13.22□□□□□ -0.29
CYTIPO60759 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CYTIPO60759 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.22□□□□□ -0.29
CYTIPO60759 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.22□□□□□ -0.29
CYTIPO60759 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.22□□□□□ -0.29
CYTIPO60759 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.22□□□□□ -0.29
CYTIPO60759 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.22□□□□□ -0.29
CYTIPO60759 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.22□□□□□ -0.29
CYTIPO60759 AP001002.3-201ENST00000623482 206 ntBASIC13.22□□□□□ -0.29
CYTIPO60759 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CYTIPO60759 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CYTIPO60759 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.22□□□□□ -0.29
CYTIPO60759 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.22□□□□□ -0.29
CYTIPO60759 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
CYTIPO60759 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
CYTIPO60759 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CYTIPO60759 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CYTIPO60759 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
CYTIPO60759 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.22□□□□□ -0.29
CYTIPO60759 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CYTIPO60759 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CYTIPO60759 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CYTIPO60759 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
CYTIPO60759 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.21□□□□□ -0.29
CYTIPO60759 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.21□□□□□ -0.29
CYTIPO60759 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.21□□□□□ -0.29
CYTIPO60759 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CYTIPO60759 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CYTIPO60759 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.21□□□□□ -0.29
CYTIPO60759 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CYTIPO60759 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CYTIPO60759 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
CYTIPO60759 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CYTIPO60759 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.21□□□□□ -0.29
CYTIPO60759 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.21□□□□□ -0.29
CYTIPO60759 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.21□□□□□ -0.29
CYTIPO60759 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.21□□□□□ -0.29
CYTIPO60759 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CYTIPO60759 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.21□□□□□ -0.29
CYTIPO60759 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CYTIPO60759 AC100850.1-201ENST00000506768 649 ntBASIC13.21□□□□□ -0.29
CYTIPO60759 FAM86HP-204ENST00000513466 959 ntBASIC13.21□□□□□ -0.29
CYTIPO60759 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CYTIPO60759 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.21□□□□□ -0.29
CYTIPO60759 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.21□□□□□ -0.29
CYTIPO60759 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.21□□□□□ -0.29
CYTIPO60759 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.21□□□□□ -0.29
CYTIPO60759 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.21□□□□□ -0.29
CYTIPO60759 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.21□□□□□ -0.29
CYTIPO60759 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.21□□□□□ -0.29
CYTIPO60759 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.21□□□□□ -0.29
CYTIPO60759 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
CYTIPO60759 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CYTIPO60759 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.21□□□□□ -0.29
CYTIPO60759 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CYTIPO60759 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CYTIPO60759 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.21□□□□□ -0.29
CYTIPO60759 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CYTIPO60759 SHC1P1-201ENST00000425230 1745 ntBASIC13.21□□□□□ -0.3
CYTIPO60759 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.21□□□□□ -0.3
CYTIPO60759 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CYTIPO60759 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
CYTIPO60759 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CYTIPO60759 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms