Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HCN1O60741 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
HCN1O60741 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HCN1O60741 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HCN1O60741 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HCN1O60741 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
HCN1O60741 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HCN1O60741 HSPA7-201ENST00000445535 1927 ntBASIC13.9□□□□□ -0.18
HCN1O60741 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.9□□□□□ -0.18
HCN1O60741 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HCN1O60741 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HCN1O60741 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.9□□□□□ -0.18
HCN1O60741 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.9□□□□□ -0.18
HCN1O60741 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HCN1O60741 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.9□□□□□ -0.18
HCN1O60741 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HCN1O60741 AC004066.1-201ENST00000502488 802 ntBASIC13.9□□□□□ -0.18
HCN1O60741 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HCN1O60741 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.9□□□□□ -0.18
HCN1O60741 RNA5SP412-201ENST00000516234 123 ntBASIC13.9□□□□□ -0.18
HCN1O60741 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.9□□□□□ -0.18
HCN1O60741 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HCN1O60741 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.9□□□□□ -0.18
HCN1O60741 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.9□□□□□ -0.18
HCN1O60741 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.9□□□□□ -0.18
HCN1O60741 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
HCN1O60741 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.9□□□□□ -0.18
HCN1O60741 RHOXF1P1-202ENST00000635473 501 ntBASIC13.9□□□□□ -0.18
HCN1O60741 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HCN1O60741 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.9□□□□□ -0.18
HCN1O60741 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HCN1O60741 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
HCN1O60741 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HCN1O60741 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
HCN1O60741 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HCN1O60741 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HCN1O60741 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HCN1O60741 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
HCN1O60741 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.9□□□□□ -0.18
HCN1O60741 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.9□□□□□ -0.18
HCN1O60741 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HCN1O60741 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HCN1O60741 BX640514.1-201ENST00000583223 1918 ntBASIC13.9□□□□□ -0.18
HCN1O60741 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.9□□□□□ -0.18
HCN1O60741 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.9□□□□□ -0.18
HCN1O60741 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HCN1O60741 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
HCN1O60741 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
HCN1O60741 AC093525.8-201ENST00000624099 1342 ntBASIC13.9□□□□□ -0.19
HCN1O60741 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCN1O60741 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
HCN1O60741 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCN1O60741 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCN1O60741 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCN1O60741 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCN1O60741 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCN1O60741 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
HCN1O60741 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCN1O60741 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.89□□□□□ -0.19
HCN1O60741 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCN1O60741 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HCN1O60741 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCN1O60741 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCN1O60741 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.89□□□□□ -0.19
HCN1O60741 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCN1O60741 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.89□□□□□ -0.19
HCN1O60741 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.89□□□□□ -0.19
HCN1O60741 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HCN1O60741 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.89□□□□□ -0.19
HCN1O60741 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.89□□□□□ -0.19
HCN1O60741 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.89□□□□□ -0.19
HCN1O60741 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.89□□□□□ -0.19
HCN1O60741 CSF2RBP1-201ENST00000447905 391 ntBASIC13.89□□□□□ -0.19
HCN1O60741 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
HCN1O60741 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.89□□□□□ -0.19
HCN1O60741 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.89□□□□□ -0.19
HCN1O60741 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.89□□□□□ -0.19
HCN1O60741 KRT90P-201ENST00000549264 1064 ntBASIC13.89□□□□□ -0.19
HCN1O60741 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.89□□□□□ -0.19
HCN1O60741 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCN1O60741 AC025279.2-201ENST00000569730 653 ntBASIC13.89□□□□□ -0.19
HCN1O60741 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.89□□□□□ -0.19
HCN1O60741 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.89□□□□□ -0.19
HCN1O60741 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.89□□□□□ -0.19
HCN1O60741 MIR6799-201ENST00000620297 69 ntBASIC13.89□□□□□ -0.19
HCN1O60741 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCN1O60741 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.89□□□□□ -0.19
HCN1O60741 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCN1O60741 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HCN1O60741 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.89□□□□□ -0.19
HCN1O60741 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCN1O60741 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
HCN1O60741 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCN1O60741 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.89□□□□□ -0.19
HCN1O60741 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HCN1O60741 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.89□□□□□ -0.19
HCN1O60741 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HCN1O60741 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.89□□□□□ -0.19
HCN1O60741 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HCN1O60741 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms