Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CTNND1O60716 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC17.15■□□□□ 0.34
CTNND1O60716 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC17.15■□□□□ 0.34
CTNND1O60716 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTNND1O60716 AC009560.1-201ENST00000620208 434 ntBASIC17.15■□□□□ 0.34
CTNND1O60716 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC17.15■□□□□ 0.34
CTNND1O60716 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTNND1O60716 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTNND1O60716 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTNND1O60716 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTNND1O60716 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.15■□□□□ 0.34
CTNND1O60716 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.15■□□□□ 0.34
CTNND1O60716 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CTNND1O60716 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTNND1O60716 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTNND1O60716 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CTNND1O60716 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.15■□□□□ 0.34
CTNND1O60716 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CTNND1O60716 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
CTNND1O60716 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTNND1O60716 AC139712.1-201ENST00000378256 1875 ntBASIC17.14■□□□□ 0.33
CTNND1O60716 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTNND1O60716 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC17.14■□□□□ 0.33
CTNND1O60716 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CTNND1O60716 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC17.14■□□□□ 0.33
CTNND1O60716 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTNND1O60716 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTNND1O60716 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC17.14■□□□□ 0.33
CTNND1O60716 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC17.14■□□□□ 0.33
CTNND1O60716 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC17.14■□□□□ 0.33
CTNND1O60716 NAGK-204ENST00000443872 878 ntTSL 3 BASIC17.14■□□□□ 0.33
CTNND1O60716 CHCHD2P9-201ENST00000461726 456 ntBASIC17.14■□□□□ 0.33
CTNND1O60716 NDUFS6P1-201ENST00000485187 316 ntBASIC17.14■□□□□ 0.33
CTNND1O60716 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC17.14■□□□□ 0.33
CTNND1O60716 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.14■□□□□ 0.33
CTNND1O60716 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTNND1O60716 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC17.14■□□□□ 0.33
CTNND1O60716 WT1-AS_6.1-201ENST00000614919 121 ntBASIC17.14■□□□□ 0.33
CTNND1O60716 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CTNND1O60716 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTNND1O60716 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTNND1O60716 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTNND1O60716 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTNND1O60716 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTNND1O60716 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CTNND1O60716 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CTNND1O60716 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CTNND1O60716 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CTNND1O60716 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
CTNND1O60716 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTNND1O60716 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTNND1O60716 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.13■□□□□ 0.33
CTNND1O60716 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC17.13■□□□□ 0.33
CTNND1O60716 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTNND1O60716 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CTNND1O60716 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTNND1O60716 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTNND1O60716 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CTNND1O60716 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTNND1O60716 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CTNND1O60716 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.13■□□□□ 0.33
CTNND1O60716 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTNND1O60716 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CTNND1O60716 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTNND1O60716 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CTNND1O60716 SOD2-202ENST00000367054 815 ntTSL 2 BASIC17.13■□□□□ 0.33
CTNND1O60716 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC17.13■□□□□ 0.33
CTNND1O60716 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTNND1O60716 AL807761.2-201ENST00000422849 729 ntBASIC17.13■□□□□ 0.33
CTNND1O60716 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC17.13■□□□□ 0.33
CTNND1O60716 AL627422.1-201ENST00000434104 580 ntBASIC17.13■□□□□ 0.33
CTNND1O60716 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.13■□□□□ 0.33
CTNND1O60716 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC17.13■□□□□ 0.33
CTNND1O60716 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTNND1O60716 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC17.13■□□□□ 0.33
CTNND1O60716 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC17.13■□□□□ 0.33
CTNND1O60716 AC007881.3-201ENST00000608897 607 ntBASIC17.13■□□□□ 0.33
CTNND1O60716 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTNND1O60716 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTNND1O60716 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTNND1O60716 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CTNND1O60716 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC17.13■□□□□ 0.33
CTNND1O60716 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTNND1O60716 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CTNND1O60716 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTNND1O60716 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.13■□□□□ 0.33
CTNND1O60716 ACE3P-201ENST00000423435 1973 ntBASIC17.13■□□□□ 0.33
CTNND1O60716 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTNND1O60716 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.13■□□□□ 0.33
CTNND1O60716 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTNND1O60716 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CTNND1O60716 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CTNND1O60716 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CTNND1O60716 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.12■□□□□ 0.33
CTNND1O60716 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNND1O60716 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC17.12■□□□□ 0.33
CTNND1O60716 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CTNND1O60716 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CTNND1O60716 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC17.12■□□□□ 0.33
CTNND1O60716 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms