Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
IDH3BO43837 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.69□□□□□ -0.22
IDH3BO43837 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
IDH3BO43837 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
IDH3BO43837 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IDH3BO43837 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.68□□□□□ -0.22
IDH3BO43837 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IDH3BO43837 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
IDH3BO43837 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IDH3BO43837 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.68□□□□□ -0.22
IDH3BO43837 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IDH3BO43837 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IDH3BO43837 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
IDH3BO43837 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IDH3BO43837 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IDH3BO43837 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
IDH3BO43837 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.68□□□□□ -0.22
IDH3BO43837 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.68□□□□□ -0.22
IDH3BO43837 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
IDH3BO43837 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IDH3BO43837 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IDH3BO43837 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.68□□□□□ -0.22
IDH3BO43837 AC097493.3-201ENST00000509725 367 ntBASIC13.68□□□□□ -0.22
IDH3BO43837 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.68□□□□□ -0.22
IDH3BO43837 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.68□□□□□ -0.22
IDH3BO43837 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.68□□□□□ -0.22
IDH3BO43837 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IDH3BO43837 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.68□□□□□ -0.22
IDH3BO43837 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.68□□□□□ -0.22
IDH3BO43837 AL590560.3-201ENST00000623350 461 ntBASIC13.68□□□□□ -0.22
IDH3BO43837 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC13.68□□□□□ -0.22
IDH3BO43837 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IDH3BO43837 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IDH3BO43837 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
IDH3BO43837 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.68□□□□□ -0.22
IDH3BO43837 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IDH3BO43837 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IDH3BO43837 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
IDH3BO43837 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
IDH3BO43837 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
IDH3BO43837 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
IDH3BO43837 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
IDH3BO43837 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
IDH3BO43837 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
IDH3BO43837 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
IDH3BO43837 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IDH3BO43837 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IDH3BO43837 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
IDH3BO43837 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IDH3BO43837 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IDH3BO43837 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IDH3BO43837 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.67□□□□□ -0.22
IDH3BO43837 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IDH3BO43837 AC100757.3-201ENST00000622361 1406 ntBASIC13.67□□□□□ -0.22
IDH3BO43837 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.67□□□□□ -0.22
IDH3BO43837 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
IDH3BO43837 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IDH3BO43837 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IDH3BO43837 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
IDH3BO43837 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IDH3BO43837 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IDH3BO43837 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IDH3BO43837 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IDH3BO43837 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.67□□□□□ -0.22
IDH3BO43837 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.67□□□□□ -0.22
IDH3BO43837 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.67□□□□□ -0.22
IDH3BO43837 AC092580.3-201ENST00000430932 139 ntBASIC13.67□□□□□ -0.22
IDH3BO43837 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.67□□□□□ -0.22
IDH3BO43837 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.67□□□□□ -0.22
IDH3BO43837 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
IDH3BO43837 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.67□□□□□ -0.22
IDH3BO43837 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.67□□□□□ -0.22
IDH3BO43837 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
IDH3BO43837 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.67□□□□□ -0.22
IDH3BO43837 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.67□□□□□ -0.22
IDH3BO43837 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.67□□□□□ -0.22
IDH3BO43837 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
IDH3BO43837 AL158212.4-201ENST00000624062 1286 ntBASIC13.67□□□□□ -0.22
IDH3BO43837 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.67□□□□□ -0.22
IDH3BO43837 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
IDH3BO43837 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
IDH3BO43837 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IDH3BO43837 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
IDH3BO43837 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
IDH3BO43837 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC13.67□□□□□ -0.22
IDH3BO43837 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
IDH3BO43837 AC018665.1-201ENST00000622927 1362 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms