Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 ACE3P-201ENST00000423435 1973 ntBASIC10.68□□□□□ -0.7
PAX4O43316 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 PPP1R26P4-201ENST00000619065 3527 ntBASIC10.68□□□□□ -0.7
PAX4O43316 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
PAX4O43316 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC10.68□□□□□ -0.7
PAX4O43316 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 SLC9A7P1-202ENST00000556476 2239 ntBASIC10.68□□□□□ -0.7
PAX4O43316 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
PAX4O43316 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
PAX4O43316 UCKL1-AS1-201ENST00000623569 3602 ntBASIC10.67□□□□□ -0.7
PAX4O43316 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 KRT8P14-201ENST00000414254 1442 ntBASIC10.67□□□□□ -0.7
PAX4O43316 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
PAX4O43316 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC10.67□□□□□ -0.7
PAX4O43316 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
PAX4O43316 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
PAX4O43316 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
PAX4O43316 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC10.67□□□□□ -0.7
PAX4O43316 INTS4P1-203ENST00000641008 3683 ntBASIC10.67□□□□□ -0.7
PAX4O43316 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
PAX4O43316 KRT8P35-201ENST00000483942 1338 ntBASIC10.67□□□□□ -0.7
PAX4O43316 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC10.67□□□□□ -0.7
PAX4O43316 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
PAX4O43316 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
PAX4O43316 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
PAX4O43316 ACTG1P3-201ENST00000431775 1114 ntBASIC10.67□□□□□ -0.7
PAX4O43316 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC10.67□□□□□ -0.7
PAX4O43316 AL355864.2-201ENST00000447420 863 ntBASIC10.67□□□□□ -0.7
PAX4O43316 KRT17P7-201ENST00000451704 1104 ntBASIC10.67□□□□□ -0.7
PAX4O43316 AC007389.4-201ENST00000454674 793 ntBASIC10.67□□□□□ -0.7
PAX4O43316 AC093433.1-201ENST00000458048 571 ntBASIC10.67□□□□□ -0.7
PAX4O43316 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC10.67□□□□□ -0.7
PAX4O43316 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC10.67□□□□□ -0.7
PAX4O43316 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC10.67□□□□□ -0.7
PAX4O43316 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC10.67□□□□□ -0.7
PAX4O43316 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC10.67□□□□□ -0.7
PAX4O43316 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
PAX4O43316 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
PAX4O43316 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC10.67□□□□□ -0.7
PAX4O43316 POLE2-203ENST00000553805 496 ntTSL 2 BASIC10.67□□□□□ -0.7
PAX4O43316 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
PAX4O43316 AC010319.3-201ENST00000597028 470 ntBASIC10.67□□□□□ -0.7
PAX4O43316 AC105148.1-201ENST00000604961 409 ntBASIC10.67□□□□□ -0.7
PAX4O43316 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
PAX4O43316 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC10.67□□□□□ -0.7
PAX4O43316 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 LINC01101-201ENST00000622953 1884 ntBASIC10.67□□□□□ -0.7
PAX4O43316 AL137783.1-201ENST00000623494 1896 ntBASIC10.67□□□□□ -0.7
PAX4O43316 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC10.67□□□□□ -0.7
PAX4O43316 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
PAX4O43316 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
PAX4O43316 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC10.67□□□□□ -0.7
PAX4O43316 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC10.67□□□□□ -0.7
PAX4O43316 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC10.67□□□□□ -0.7
PAX4O43316 AC023908.3-201ENST00000564211 3047 ntBASIC10.67□□□□□ -0.7
PAX4O43316 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
PAX4O43316 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC10.67□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms