Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC7O00311 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.51□□□□□ -0.09
CDC7O00311 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC7O00311 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.51□□□□□ -0.09
CDC7O00311 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC7O00311 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC7O00311 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDC7O00311 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDC7O00311 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.51□□□□□ -0.09
CDC7O00311 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.51□□□□□ -0.09
CDC7O00311 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.51□□□□□ -0.09
CDC7O00311 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDC7O00311 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC7O00311 RN7SKP175-201ENST00000408472 289 ntBASIC14.51□□□□□ -0.09
CDC7O00311 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.51□□□□□ -0.09
CDC7O00311 AP003171.2-201ENST00000528208 925 ntBASIC14.51□□□□□ -0.09
CDC7O00311 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.51□□□□□ -0.09
CDC7O00311 AC106820.3-201ENST00000561653 397 ntBASIC14.51□□□□□ -0.09
CDC7O00311 AL596325.1-201ENST00000563991 1082 ntBASIC14.51□□□□□ -0.09
CDC7O00311 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.51□□□□□ -0.09
CDC7O00311 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC7O00311 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDC7O00311 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC7O00311 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC7O00311 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDC7O00311 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDC7O00311 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC7O00311 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC7O00311 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDC7O00311 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CDC7O00311 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC7O00311 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC7O00311 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC7O00311 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDC7O00311 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDC7O00311 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDC7O00311 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.51□□□□□ -0.09
CDC7O00311 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.51□□□□□ -0.09
CDC7O00311 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDC7O00311 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC7O00311 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CDC7O00311 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC7O00311 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.51□□□□□ -0.09
CDC7O00311 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CDC7O00311 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC7O00311 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC7O00311 AC139712.1-201ENST00000378256 1875 ntBASIC14.5□□□□□ -0.09
CDC7O00311 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC7O00311 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC7O00311 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDC7O00311 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CDC7O00311 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC7O00311 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CDC7O00311 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC7O00311 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDC7O00311 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDC7O00311 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC7O00311 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CDC7O00311 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CDC7O00311 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDC7O00311 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC7O00311 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC7O00311 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC7O00311 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CDC7O00311 TTTY23B-201ENST00000442790 549 ntBASIC14.5□□□□□ -0.09
CDC7O00311 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.5□□□□□ -0.09
CDC7O00311 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CDC7O00311 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.5□□□□□ -0.09
CDC7O00311 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.5□□□□□ -0.09
CDC7O00311 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDC7O00311 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.5□□□□□ -0.09
CDC7O00311 BX088702.1-201ENST00000610784 235 ntBASIC14.5□□□□□ -0.09
CDC7O00311 AC244669.2-201ENST00000612320 853 ntBASIC14.5□□□□□ -0.09
CDC7O00311 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.5□□□□□ -0.09
CDC7O00311 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC7O00311 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.5□□□□□ -0.09
CDC7O00311 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC7O00311 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDC7O00311 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC7O00311 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.5□□□□□ -0.09
CDC7O00311 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.5□□□□□ -0.09
CDC7O00311 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC7O00311 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC7O00311 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC7O00311 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC7O00311 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.5□□□□□ -0.09
CDC7O00311 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.5□□□□□ -0.09
CDC7O00311 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.5□□□□□ -0.09
CDC7O00311 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CDC7O00311 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC7O00311 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.5□□□□□ -0.09
CDC7O00311 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDC7O00311 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.5□□□□□ -0.09
CDC7O00311 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CDC7O00311 KHSRPP1-201ENST00000427983 1768 ntBASIC14.5□□□□□ -0.09
CDC7O00311 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC7O00311 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC7O00311 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC7O00311 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.49□□□□□ -0.09
CDC7O00311 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms