Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC21.42■■□□□ 1.02
HFM1A2PYH4 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HFM1A2PYH4 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC21.42■■□□□ 1.02
HFM1A2PYH4 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC21.42■■□□□ 1.02
HFM1A2PYH4 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC21.42■■□□□ 1.02
HFM1A2PYH4 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HFM1A2PYH4 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HFM1A2PYH4 MAX-218ENST00000557746 571 ntTSL 4 BASIC21.42■■□□□ 1.02
HFM1A2PYH4 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC21.42■■□□□ 1.02
HFM1A2PYH4 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
HFM1A2PYH4 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC21.42■■□□□ 1.02
HFM1A2PYH4 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC21.42■■□□□ 1.02
HFM1A2PYH4 AC009145.4-201ENST00000625119 1294 ntBASIC21.42■■□□□ 1.02
HFM1A2PYH4 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC21.42■■□□□ 1.02
HFM1A2PYH4 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
HFM1A2PYH4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HFM1A2PYH4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HFM1A2PYH4 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HFM1A2PYH4 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
HFM1A2PYH4 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
HFM1A2PYH4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HFM1A2PYH4 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HFM1A2PYH4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HFM1A2PYH4 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
HFM1A2PYH4 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
HFM1A2PYH4 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC21.42■■□□□ 1.02
HFM1A2PYH4 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HFM1A2PYH4 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC21.41■■□□□ 1.02
HFM1A2PYH4 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HFM1A2PYH4 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
HFM1A2PYH4 AL596257.1-201ENST00000641463 2694 ntBASIC21.41■■□□□ 1.02
HFM1A2PYH4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
HFM1A2PYH4 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC21.41■■□□□ 1.02
HFM1A2PYH4 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HFM1A2PYH4 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC21.41■■□□□ 1.02
HFM1A2PYH4 DUTP3-201ENST00000450025 415 ntBASIC21.41■■□□□ 1.02
HFM1A2PYH4 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
HFM1A2PYH4 NAT9-220ENST00000582870 896 ntTSL 5 BASIC21.41■■□□□ 1.02
HFM1A2PYH4 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC21.41■■□□□ 1.02
HFM1A2PYH4 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC21.41■■□□□ 1.02
HFM1A2PYH4 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC21.41■■□□□ 1.02
HFM1A2PYH4 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HFM1A2PYH4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HFM1A2PYH4 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
HFM1A2PYH4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HFM1A2PYH4 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
HFM1A2PYH4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
HFM1A2PYH4 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
HFM1A2PYH4 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC21.41■■□□□ 1.02
HFM1A2PYH4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
HFM1A2PYH4 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
HFM1A2PYH4 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC21.41■■□□□ 1.02
HFM1A2PYH4 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HFM1A2PYH4 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HFM1A2PYH4 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HFM1A2PYH4 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC21.4■■□□□ 1.02
HFM1A2PYH4 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC21.4■■□□□ 1.02
HFM1A2PYH4 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC21.4■■□□□ 1.02
HFM1A2PYH4 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HFM1A2PYH4 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HFM1A2PYH4 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HFM1A2PYH4 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC21.4■■□□□ 1.02
HFM1A2PYH4 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HFM1A2PYH4 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC21.4■■□□□ 1.02
HFM1A2PYH4 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HFM1A2PYH4 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HFM1A2PYH4 MPV17-204ENST00000399052 749 ntTSL 4 BASIC21.4■■□□□ 1.02
HFM1A2PYH4 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HFM1A2PYH4 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC21.4■■□□□ 1.02
HFM1A2PYH4 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC21.4■■□□□ 1.02
HFM1A2PYH4 AC019193.1-201ENST00000506678 823 ntBASIC21.4■■□□□ 1.02
HFM1A2PYH4 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC21.4■■□□□ 1.02
HFM1A2PYH4 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
HFM1A2PYH4 AC007718.1-201ENST00000621078 280 ntBASIC21.4■■□□□ 1.02
HFM1A2PYH4 AC007191.1-201ENST00000623179 2995 ntBASIC21.4■■□□□ 1.02
HFM1A2PYH4 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HFM1A2PYH4 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
HFM1A2PYH4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC21.4■■□□□ 1.02
HFM1A2PYH4 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HFM1A2PYH4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
HFM1A2PYH4 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HFM1A2PYH4 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HFM1A2PYH4 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC21.4■■□□□ 1.02
HFM1A2PYH4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HFM1A2PYH4 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC21.4■■□□□ 1.02
HFM1A2PYH4 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
HFM1A2PYH4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HFM1A2PYH4 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC21.39■■□□□ 1.02
HFM1A2PYH4 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC21.39■■□□□ 1.02
HFM1A2PYH4 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
HFM1A2PYH4 AC253536.4-201ENST00000440539 267 ntBASIC21.39■■□□□ 1.02
HFM1A2PYH4 AC114947.1-202ENST00000514136 344 ntBASIC21.39■■□□□ 1.02
HFM1A2PYH4 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC21.39■■□□□ 1.02
HFM1A2PYH4 AC138894.2-201ENST00000602838 371 ntBASIC21.39■■□□□ 1.02
HFM1A2PYH4 AC051619.9-201ENST00000623237 597 ntBASIC21.39■■□□□ 1.02
HFM1A2PYH4 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
HFM1A2PYH4 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC21.39■■□□□ 1.02
HFM1A2PYH4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HFM1A2PYH4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HFM1A2PYH4 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms