Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.42■□□□□ 0.54
LOC102724428A0A0B4J2F2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 HINT1-205ENST00000508488 703 ntTSL 2 BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 EIF5AP2-201ENST00000585668 1047 ntBASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 AL021707.6-201ENST00000609212 491 ntBASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LOC102724428A0A0B4J2F2 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 PPP1R2P4-201ENST00000424051 595 ntBASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 IGHV1-12-201ENST00000518307 205 ntBASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 PEBP1P2-201ENST00000603980 558 ntBASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 HMGB1P24-201ENST00000611897 328 ntBASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
LOC102724428A0A0B4J2F2 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms