Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 RNA5SP359-201ENST00000364838 113 ntBASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 CTBP2P4-201ENST00000513884 920 ntBASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 GMFG-209ENST00000600322 622 ntTSL 5 BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 AC020658.6-201ENST00000623564 1870 ntBASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 TMBIM7P-202ENST00000641474 1516 ntBASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.94□□□□□ -0.18
CCDC187A0A096LP49 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 AC114947.1-202ENST00000514136 344 ntBASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 AC067930.6-201ENST00000623257 4947 ntBASIC13.93□□□□□ -0.18
CCDC187A0A096LP49 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 MROH4P-201ENST00000431302 1578 ntBASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 KRT8P31-201ENST00000504812 1408 ntBASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.92□□□□□ -0.18
CCDC187A0A096LP49 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms