Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 HINT1-205ENST00000508488 703 ntTSL 2 BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 HMGB1P24-201ENST00000611897 328 ntBASIC19.72■□□□□ 0.75
PHF8Q9UPP1 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.72■□□□□ 0.75
PHF8Q9UPP1 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHF8Q9UPP1 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC19.71■□□□□ 0.75
PHF8Q9UPP1 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PHF8Q9UPP1 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHF8Q9UPP1 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHF8Q9UPP1 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PHF8Q9UPP1 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PHF8Q9UPP1 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PHF8Q9UPP1 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC19.71■□□□□ 0.75
PHF8Q9UPP1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHF8Q9UPP1 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHF8Q9UPP1 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHF8Q9UPP1 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHF8Q9UPP1 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHF8Q9UPP1 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHF8Q9UPP1 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC19.71■□□□□ 0.75
PHF8Q9UPP1 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC19.71■□□□□ 0.75
PHF8Q9UPP1 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHF8Q9UPP1 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHF8Q9UPP1 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC19.71■□□□□ 0.75
PHF8Q9UPP1 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PHF8Q9UPP1 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC19.71■□□□□ 0.75
PHF8Q9UPP1 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
PHF8Q9UPP1 HYMAI-201ENST00000635591 3347 ntBASIC19.71■□□□□ 0.75
PHF8Q9UPP1 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PHF8Q9UPP1 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHF8Q9UPP1 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHF8Q9UPP1 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHF8Q9UPP1 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHF8Q9UPP1 AL162727.3-201ENST00000635661 2787 ntBASIC19.71■□□□□ 0.75
PHF8Q9UPP1 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PHF8Q9UPP1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PHF8Q9UPP1 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 AC244197.1-201ENST00000456494 951 ntBASIC19.7■□□□□ 0.74
PHF8Q9UPP1 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 IGHV1-12-201ENST00000518307 205 ntBASIC19.7■□□□□ 0.74
PHF8Q9UPP1 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 TREHP1-201ENST00000531328 465 ntBASIC19.7■□□□□ 0.74
PHF8Q9UPP1 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 AL021707.6-201ENST00000609212 491 ntBASIC19.7■□□□□ 0.74
PHF8Q9UPP1 AC010976.2-201ENST00000609697 852 ntBASIC19.7■□□□□ 0.74
PHF8Q9UPP1 MIR6746-201ENST00000620971 63 ntBASIC19.7■□□□□ 0.74
PHF8Q9UPP1 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC19.7■□□□□ 0.74
PHF8Q9UPP1 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC19.69■□□□□ 0.74
PHF8Q9UPP1 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC19.69■□□□□ 0.74
PHF8Q9UPP1 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC19.69■□□□□ 0.74
PHF8Q9UPP1 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC19.69■□□□□ 0.74
PHF8Q9UPP1 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHF8Q9UPP1 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHF8Q9UPP1 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PHF8Q9UPP1 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC19.69■□□□□ 0.74
PHF8Q9UPP1 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms