Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 AC004449.1-201ENST00000564240 433 ntBASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 KHSRPP1-201ENST00000427983 1768 ntBASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 AL137783.1-201ENST00000623494 1896 ntBASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RIMS3Q9UJD0 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 AC140878.1-201ENST00000565277 250 ntBASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 AC004461.2-201ENST00000629517 803 ntBASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 KRT8P14-201ENST00000414254 1442 ntBASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIMS3Q9UJD0 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms