Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 BCYRN1-201ENST00000418539 200 ntBASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 MIR4754-201ENST00000582477 89 ntBASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 AC138627.1-207ENST00000641560 1006 ntBASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPC1L1Q9UHC9 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 AL512310.5-201ENST00000551999 515 ntBASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NPC1L1Q9UHC9 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 CMC1-204ENST00000423894 549 ntTSL 2 BASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 AC005077.2-201ENST00000449786 690 ntBASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 RN7SL574P-201ENST00000581512 297 ntBASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 AF254983.2-201ENST00000612331 135 ntBASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 AC091544.8-201ENST00000619490 361 ntBASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 AC068587.10-201ENST00000641210 219 ntBASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPC1L1Q9UHC9 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC19.52■□□□□ 0.71
NPC1L1Q9UHC9 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.71
NPC1L1Q9UHC9 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
NPC1L1Q9UHC9 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
NPC1L1Q9UHC9 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms