Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 FXYD3-210ENST00000604621 548 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 SARS-202ENST00000369923 1882 ntTSL 5 BASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 GCK-209ENST00000616242 2260 ntTSL 5 BASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 LINC00115-201ENST00000473798 1317 ntBASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 AC015813.5-201ENST00000624641 1514 ntBASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 NOS2P3-201ENST00000411468 867 ntBASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 NOS2P2-201ENST00000426269 867 ntBASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 AL161644.1-201ENST00000426901 1111 ntTSL 2 BASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 ELOBP2-201ENST00000526184 355 ntBASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 AP001505.1-201ENST00000569966 824 ntBASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RIMBP3Q9UFD9 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
RIMBP3Q9UFD9 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RIMBP3Q9UFD9 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RIMBP3Q9UFD9 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RIMBP3Q9UFD9 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC22.3■■□□□ 1.16
RIMBP3Q9UFD9 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RIMBP3Q9UFD9 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC22.3■■□□□ 1.16
RIMBP3Q9UFD9 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
RIMBP3Q9UFD9 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
RIMBP3Q9UFD9 MGST3-204ENST00000367888 778 ntTSL 3 BASIC22.3■■□□□ 1.16
RIMBP3Q9UFD9 HLA-DQB3-203ENST00000425319 356 ntBASIC22.3■■□□□ 1.16
RIMBP3Q9UFD9 LINC01508-201ENST00000425666 1013 ntTSL 3 BASIC22.3■■□□□ 1.16
RIMBP3Q9UFD9 CNN2P1-201ENST00000453616 918 ntBASIC22.3■■□□□ 1.16
RIMBP3Q9UFD9 KRT18P42-201ENST00000505048 1255 ntBASIC22.3■■□□□ 1.16
RIMBP3Q9UFD9 WISP1-205ENST00000519433 545 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RIMBP3Q9UFD9 PXN-AS1-205ENST00000542314 707 ntTSL 2 BASIC22.3■■□□□ 1.16
RIMBP3Q9UFD9 BRCA1-225ENST00000586385 781 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RIMBP3Q9UFD9 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RIMBP3Q9UFD9 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RIMBP3Q9UFD9 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RIMBP3Q9UFD9 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
RIMBP3Q9UFD9 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC22.3■■□□□ 1.16
RIMBP3Q9UFD9 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC22.3■■□□□ 1.16
RIMBP3Q9UFD9 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RIMBP3Q9UFD9 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RIMBP3Q9UFD9 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC22.3■■□□□ 1.16
RIMBP3Q9UFD9 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RIMBP3Q9UFD9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RIMBP3Q9UFD9 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RIMBP3Q9UFD9 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC22.29■■□□□ 1.16
RIMBP3Q9UFD9 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
RIMBP3Q9UFD9 AC106872.9-201ENST00000512437 1393 ntBASIC22.29■■□□□ 1.16
RIMBP3Q9UFD9 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RIMBP3Q9UFD9 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
RIMBP3Q9UFD9 LCN12-202ENST00000371633 579 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RIMBP3Q9UFD9 RPSAP61-201ENST00000412542 878 ntBASIC22.29■■□□□ 1.16
RIMBP3Q9UFD9 PRRX2-AS1-201ENST00000440413 429 ntTSL 2 BASIC22.29■■□□□ 1.16
RIMBP3Q9UFD9 PRDX3P2-201ENST00000447051 611 ntBASIC22.29■■□□□ 1.16
RIMBP3Q9UFD9 AL359915.1-201ENST00000457719 898 ntTSL 2 BASIC22.29■■□□□ 1.16
RIMBP3Q9UFD9 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC22.29■■□□□ 1.16
RIMBP3Q9UFD9 AP003062.1-201ENST00000528497 762 ntTSL 3 BASIC22.29■■□□□ 1.16
RIMBP3Q9UFD9 AC009779.7-201ENST00000609031 469 ntBASIC22.29■■□□□ 1.16
RIMBP3Q9UFD9 MIR8071-1-201ENST00000616769 65 ntBASIC22.29■■□□□ 1.16
RIMBP3Q9UFD9 MIR8071-2-201ENST00000616772 65 ntBASIC22.29■■□□□ 1.16
RIMBP3Q9UFD9 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
RIMBP3Q9UFD9 ENO3-201ENST00000323997 1521 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
RIMBP3Q9UFD9 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RIMBP3Q9UFD9 AC018470.1-201ENST00000624790 3129 ntBASIC22.29■■□□□ 1.16
RIMBP3Q9UFD9 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RIMBP3Q9UFD9 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC22.29■■□□□ 1.16
RIMBP3Q9UFD9 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC22.29■■□□□ 1.16
RIMBP3Q9UFD9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RIMBP3Q9UFD9 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RIMBP3Q9UFD9 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC22.29■■□□□ 1.16
RIMBP3Q9UFD9 GABPB1-206ENST00000543881 1450 ntTSL 2 BASIC22.29■■□□□ 1.16
RIMBP3Q9UFD9 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RIMBP3Q9UFD9 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RIMBP3Q9UFD9 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
RIMBP3Q9UFD9 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC22.28■■□□□ 1.16
RIMBP3Q9UFD9 IMMP1L-201ENST00000278200 795 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
RIMBP3Q9UFD9 OR8B8-201ENST00000328064 1033 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
RIMBP3Q9UFD9 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC22.28■■□□□ 1.16
RIMBP3Q9UFD9 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC22.28■■□□□ 1.16
RIMBP3Q9UFD9 AC159540.1-201ENST00000422600 555 ntTSL 4 BASIC22.28■■□□□ 1.16
RIMBP3Q9UFD9 RBMX2P5-201ENST00000424312 969 ntBASIC22.28■■□□□ 1.16
RIMBP3Q9UFD9 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC22.28■■□□□ 1.16
RIMBP3Q9UFD9 AL136360.2-201ENST00000502636 581 ntTSL 4 BASIC22.28■■□□□ 1.16
RIMBP3Q9UFD9 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RIMBP3Q9UFD9 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC22.28■■□□□ 1.16
RIMBP3Q9UFD9 IGHD-202ENST00000613640 1155 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
RIMBP3Q9UFD9 AC026120.2-201ENST00000617239 309 ntBASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms