Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL20A1Q9P218 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL20A1Q9P218 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.53■□□□□ 0.24
COL20A1Q9P218 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL20A1Q9P218 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL20A1Q9P218 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL20A1Q9P218 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL20A1Q9P218 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
COL20A1Q9P218 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.52■□□□□ 0.24
COL20A1Q9P218 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.52■□□□□ 0.24
COL20A1Q9P218 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL20A1Q9P218 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL20A1Q9P218 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL20A1Q9P218 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.52■□□□□ 0.24
COL20A1Q9P218 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL20A1Q9P218 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.52■□□□□ 0.24
COL20A1Q9P218 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COL20A1Q9P218 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COL20A1Q9P218 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
COL20A1Q9P218 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
COL20A1Q9P218 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC16.52■□□□□ 0.24
COL20A1Q9P218 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL20A1Q9P218 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL20A1Q9P218 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COL20A1Q9P218 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL20A1Q9P218 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.52■□□□□ 0.24
COL20A1Q9P218 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.52■□□□□ 0.24
COL20A1Q9P218 MIR33B-201ENST00000385104 96 ntBASIC16.52■□□□□ 0.24
COL20A1Q9P218 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COL20A1Q9P218 RN7SL258P-201ENST00000478664 300 ntBASIC16.52■□□□□ 0.24
COL20A1Q9P218 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COL20A1Q9P218 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.52■□□□□ 0.24
COL20A1Q9P218 MIR3677-201ENST00000578964 60 ntBASIC16.52■□□□□ 0.24
COL20A1Q9P218 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.52■□□□□ 0.24
COL20A1Q9P218 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.52■□□□□ 0.24
COL20A1Q9P218 AL022334.2-201ENST00000610000 484 ntBASIC16.52■□□□□ 0.24
COL20A1Q9P218 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
COL20A1Q9P218 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
COL20A1Q9P218 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
COL20A1Q9P218 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.52■□□□□ 0.23
COL20A1Q9P218 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.52■□□□□ 0.23
COL20A1Q9P218 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.52■□□□□ 0.23
COL20A1Q9P218 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.23
COL20A1Q9P218 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.52■□□□□ 0.23
COL20A1Q9P218 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
COL20A1Q9P218 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COL20A1Q9P218 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
COL20A1Q9P218 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.52■□□□□ 0.23
COL20A1Q9P218 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
COL20A1Q9P218 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL20A1Q9P218 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL20A1Q9P218 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
COL20A1Q9P218 AC023824.1-201ENST00000562945 2975 ntBASIC16.51■□□□□ 0.23
COL20A1Q9P218 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL20A1Q9P218 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL20A1Q9P218 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.51■□□□□ 0.23
COL20A1Q9P218 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.51■□□□□ 0.23
COL20A1Q9P218 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COL20A1Q9P218 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.51■□□□□ 0.23
COL20A1Q9P218 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COL20A1Q9P218 RPL8P2-201ENST00000430538 502 ntBASIC16.51■□□□□ 0.23
COL20A1Q9P218 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.51■□□□□ 0.23
COL20A1Q9P218 AC092580.1-201ENST00000433998 658 ntBASIC16.51■□□□□ 0.23
COL20A1Q9P218 AC026320.2-201ENST00000434379 478 ntBASIC16.51■□□□□ 0.23
COL20A1Q9P218 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.51■□□□□ 0.23
COL20A1Q9P218 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.51■□□□□ 0.23
COL20A1Q9P218 SORD2P-201ENST00000558556 1069 ntBASIC16.51■□□□□ 0.23
COL20A1Q9P218 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.51■□□□□ 0.23
COL20A1Q9P218 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.51■□□□□ 0.23
COL20A1Q9P218 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.51■□□□□ 0.23
COL20A1Q9P218 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL20A1Q9P218 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL20A1Q9P218 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COL20A1Q9P218 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.51■□□□□ 0.23
COL20A1Q9P218 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL20A1Q9P218 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COL20A1Q9P218 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.51■□□□□ 0.23
COL20A1Q9P218 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL20A1Q9P218 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL20A1Q9P218 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COL20A1Q9P218 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.51■□□□□ 0.23
COL20A1Q9P218 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.51■□□□□ 0.23
COL20A1Q9P218 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
COL20A1Q9P218 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL20A1Q9P218 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL20A1Q9P218 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COL20A1Q9P218 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL20A1Q9P218 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COL20A1Q9P218 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
COL20A1Q9P218 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COL20A1Q9P218 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL20A1Q9P218 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.5■□□□□ 0.23
COL20A1Q9P218 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL20A1Q9P218 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.5■□□□□ 0.23
COL20A1Q9P218 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COL20A1Q9P218 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL20A1Q9P218 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
COL20A1Q9P218 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL20A1Q9P218 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COL20A1Q9P218 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms